Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL353625.1-202ENST00000366273 571 ntBASIC4.83□□□□□ -1.64
RORAP35398 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RORAP35398 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RORAP35398 SNORA68.2-201ENST00000391263 128 ntBASIC4.83□□□□□ -1.64
RORAP35398 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RORAP35398 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RORAP35398 RPL37P18-201ENST00000411602 243 ntBASIC4.83□□□□□ -1.64
RORAP35398 COX6B1P1-201ENST00000415962 213 ntBASIC4.83□□□□□ -1.64
RORAP35398 CHEK2P3-201ENST00000416118 248 ntBASIC4.83□□□□□ -1.64
RORAP35398 OR2AM1P-201ENST00000422137 422 ntBASIC4.83□□□□□ -1.64
RORAP35398 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.83□□□□□ -1.64
RORAP35398 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.83□□□□□ -1.64
RORAP35398 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.83□□□□□ -1.64
RORAP35398 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RORAP35398 MTND6P32-201ENST00000457611 483 ntBASIC4.83□□□□□ -1.64
RORAP35398 AC108161.1-201ENST00000461060 402 ntBASIC4.83□□□□□ -1.64
RORAP35398 AC092324.1-201ENST00000468671 324 ntBASIC4.83□□□□□ -1.64
RORAP35398 AC020779.1-201ENST00000478757 796 ntBASIC4.83□□□□□ -1.64
RORAP35398 RPL7P16-201ENST00000479738 738 ntBASIC4.83□□□□□ -1.64
RORAP35398 RN7SL244P-201ENST00000493405 297 ntBASIC4.83□□□□□ -1.64
RORAP35398 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.83□□□□□ -1.64
RORAP35398 RNA5SP43-201ENST00000516559 110 ntBASIC4.83□□□□□ -1.64
RORAP35398 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.83□□□□□ -1.64
RORAP35398 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.83□□□□□ -1.64
RORAP35398 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.83□□□□□ -1.64
RORAP35398 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.83□□□□□ -1.64
RORAP35398 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.83□□□□□ -1.64
RORAP35398 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.83□□□□□ -1.64
RORAP35398 AC105254.2-201ENST00000603636 436 ntBASIC4.83□□□□□ -1.64
RORAP35398 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.83□□□□□ -1.64
RORAP35398 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.83□□□□□ -1.64
RORAP35398 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.83□□□□□ -1.64
RORAP35398 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.83□□□□□ -1.64
RORAP35398 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.83□□□□□ -1.64
RORAP35398 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.83□□□□□ -1.64
RORAP35398 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RORAP35398 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RORAP35398 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RORAP35398 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RORAP35398 MAPK10-286ENST00000641208 8747 ntBASIC4.82□□□□□ -1.64
RORAP35398 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
RORAP35398 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.82□□□□□ -1.64
RORAP35398 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RORAP35398 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RORAP35398 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RORAP35398 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.82□□□□□ -1.64
RORAP35398 OR13C3-201ENST00000374781 1108 ntBASIC4.82□□□□□ -1.64
RORAP35398 RNA5SP87-201ENST00000384155 118 ntBASIC4.82□□□□□ -1.64
RORAP35398 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RORAP35398 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RORAP35398 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RORAP35398 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.82□□□□□ -1.64
RORAP35398 AL049745.1-201ENST00000433953 286 ntBASIC4.82□□□□□ -1.64
RORAP35398 BTG3P1-201ENST00000435859 716 ntBASIC4.82□□□□□ -1.64
RORAP35398 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.82□□□□□ -1.64
RORAP35398 Z80107.2-201ENST00000445127 392 ntBASIC4.82□□□□□ -1.64
RORAP35398 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.82□□□□□ -1.64
RORAP35398 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.82□□□□□ -1.64
RORAP35398 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.82□□□□□ -1.64
RORAP35398 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.82□□□□□ -1.64
RORAP35398 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.82□□□□□ -1.64
RORAP35398 AC140172.1-201ENST00000502928 141 ntBASIC4.82□□□□□ -1.64
RORAP35398 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.82□□□□□ -1.64
RORAP35398 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.82□□□□□ -1.64
RORAP35398 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.82□□□□□ -1.64
RORAP35398 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.82□□□□□ -1.64
RORAP35398 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.82□□□□□ -1.64
RORAP35398 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.82□□□□□ -1.64
RORAP35398 EDDM3DP-201ENST00000554692 434 ntBASIC4.82□□□□□ -1.64
RORAP35398 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.82□□□□□ -1.64
RORAP35398 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
RORAP35398 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.82□□□□□ -1.64
RORAP35398 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.82□□□□□ -1.64
RORAP35398 AC023813.4-201ENST00000607580 580 ntBASIC4.82□□□□□ -1.64
RORAP35398 AP003400.2-201ENST00000624036 666 ntBASIC4.82□□□□□ -1.64
RORAP35398 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RORAP35398 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.82□□□□□ -1.64
RORAP35398 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RORAP35398 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.82□□□□□ -1.64
RORAP35398 AC011447.7-201ENST00000624228 1590 ntBASIC4.82□□□□□ -1.64
RORAP35398 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RORAP35398 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RORAP35398 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.82□□□□□ -1.64
RORAP35398 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RORAP35398 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RORAP35398 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RORAP35398 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RORAP35398 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RORAP35398 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RORAP35398 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
RORAP35398 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RORAP35398 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RORAP35398 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RORAP35398 CASC19-221ENST00000641309 1382 ntBASIC4.81□□□□□ -1.64
RORAP35398 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
RORAP35398 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.81□□□□□ -1.64
RORAP35398 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RORAP35398 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.81□□□□□ -1.64
RORAP35398 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RORAP35398 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms