Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
CLIP1P30622 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CLIP1P30622 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
CLIP1P30622 DDX18P5-201ENST00000534547 1306 ntBASIC7.47□□□□□ -1.21
CLIP1P30622 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CLIP1P30622 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC7.47□□□□□ -1.21
CLIP1P30622 EIF4HP2-201ENST00000424380 563 ntBASIC7.47□□□□□ -1.21
CLIP1P30622 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC7.47□□□□□ -1.21
CLIP1P30622 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC7.47□□□□□ -1.21
CLIP1P30622 H2AFZP5-201ENST00000446960 382 ntBASIC7.47□□□□□ -1.21
CLIP1P30622 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC7.47□□□□□ -1.21
CLIP1P30622 AC083829.1-201ENST00000503756 657 ntBASIC7.47□□□□□ -1.21
CLIP1P30622 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC7.47□□□□□ -1.21
CLIP1P30622 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC7.47□□□□□ -1.21
CLIP1P30622 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC7.47□□□□□ -1.21
CLIP1P30622 U3.53-201ENST00000628922 216 ntBASIC7.47□□□□□ -1.21
CLIP1P30622 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CLIP1P30622 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CLIP1P30622 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC7.47□□□□□ -1.21
CLIP1P30622 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CLIP1P30622 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CLIP1P30622 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
CLIP1P30622 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CLIP1P30622 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
CLIP1P30622 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
CLIP1P30622 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
CLIP1P30622 RNU6ATAC5P-201ENST00000388104 126 ntBASIC7.46□□□□□ -1.21
CLIP1P30622 AP000580.1-201ENST00000404439 358 ntBASIC7.46□□□□□ -1.21
CLIP1P30622 AL592293.2-201ENST00000422292 996 ntBASIC7.46□□□□□ -1.21
CLIP1P30622 AC007064.3-201ENST00000422608 359 ntBASIC7.46□□□□□ -1.21
CLIP1P30622 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC7.46□□□□□ -1.21
CLIP1P30622 RNU6ATAC28P-201ENST00000459249 118 ntBASIC7.46□□□□□ -1.21
CLIP1P30622 AL161747.1-201ENST00000480068 358 ntBASIC7.46□□□□□ -1.21
CLIP1P30622 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC7.46□□□□□ -1.21
CLIP1P30622 AC025674.1-201ENST00000507074 324 ntBASIC7.46□□□□□ -1.21
CLIP1P30622 OR8G5-201ENST00000524943 1041 ntBASIC7.46□□□□□ -1.21
CLIP1P30622 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC7.46□□□□□ -1.21
CLIP1P30622 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.46□□□□□ -1.21
CLIP1P30622 AC115286.1-201ENST00000604298 434 ntBASIC7.46□□□□□ -1.21
CLIP1P30622 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC7.46□□□□□ -1.21
CLIP1P30622 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
CLIP1P30622 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CLIP1P30622 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC7.46□□□□□ -1.22
CLIP1P30622 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC7.46□□□□□ -1.22
CLIP1P30622 MAPK10-328ENST00000641553 4009 ntBASIC7.46□□□□□ -1.22
CLIP1P30622 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CLIP1P30622 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
CLIP1P30622 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CLIP1P30622 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
CLIP1P30622 AC021146.4-201ENST00000309229 279 ntBASIC7.45□□□□□ -1.22
CLIP1P30622 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
CLIP1P30622 IGKV7-3-201ENST00000357453 298 ntBASIC7.45□□□□□ -1.22
CLIP1P30622 RNU4-39P-201ENST00000362455 127 ntBASIC7.45□□□□□ -1.22
CLIP1P30622 AC073143.1-201ENST00000436316 395 ntBASIC7.45□□□□□ -1.22
CLIP1P30622 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC7.45□□□□□ -1.22
CLIP1P30622 TCEA1P3-201ENST00000443005 880 ntBASIC7.45□□□□□ -1.22
CLIP1P30622 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC7.45□□□□□ -1.22
CLIP1P30622 MIR4675-201ENST00000577898 77 ntBASIC7.45□□□□□ -1.22
CLIP1P30622 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC7.45□□□□□ -1.22
CLIP1P30622 SS18L2P2-201ENST00000583960 235 ntBASIC7.45□□□□□ -1.22
CLIP1P30622 AC125494.2-201ENST00000602431 657 ntBASIC7.45□□□□□ -1.22
CLIP1P30622 AL133338.2-201ENST00000604292 736 ntBASIC7.45□□□□□ -1.22
CLIP1P30622 AL590392.1-201ENST00000604960 446 ntBASIC7.45□□□□□ -1.22
CLIP1P30622 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
CLIP1P30622 OR14L1P-202ENST00000641545 3009 ntBASIC7.45□□□□□ -1.22
CLIP1P30622 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
CLIP1P30622 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CLIP1P30622 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC7.45□□□□□ -1.22
CLIP1P30622 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CLIP1P30622 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CLIP1P30622 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.45□□□□□ -1.22
CLIP1P30622 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC7.45□□□□□ -1.22
CLIP1P30622 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CLIP1P30622 U3.22-201ENST00000391120 215 ntBASIC7.44□□□□□ -1.22
CLIP1P30622 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC7.44□□□□□ -1.22
CLIP1P30622 AC234779.1-201ENST00000425910 285 ntBASIC7.44□□□□□ -1.22
CLIP1P30622 AC023141.6-201ENST00000429418 337 ntBASIC7.44□□□□□ -1.22
CLIP1P30622 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC7.44□□□□□ -1.22
CLIP1P30622 Z95152.1-201ENST00000453556 656 ntBASIC7.44□□□□□ -1.22
CLIP1P30622 AC090142.1-201ENST00000465776 462 ntBASIC7.44□□□□□ -1.22
CLIP1P30622 AC090686.1-201ENST00000481577 749 ntBASIC7.44□□□□□ -1.22
CLIP1P30622 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC7.44□□□□□ -1.22
CLIP1P30622 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC7.44□□□□□ -1.22
CLIP1P30622 AL139041.1-201ENST00000605480 610 ntBASIC7.44□□□□□ -1.22
CLIP1P30622 MLECP1-201ENST00000615893 709 ntBASIC7.44□□□□□ -1.22
CLIP1P30622 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC7.44□□□□□ -1.22
CLIP1P30622 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CLIP1P30622 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
CLIP1P30622 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC7.44□□□□□ -1.22
CLIP1P30622 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC7.44□□□□□ -1.22
CLIP1P30622 ZNF137P-201ENST00000456718 1920 ntBASIC7.44□□□□□ -1.22
CLIP1P30622 MTCO1P15-201ENST00000529569 1526 ntBASIC7.44□□□□□ -1.22
CLIP1P30622 AP000473.2-201ENST00000602659 1537 ntBASIC7.44□□□□□ -1.22
CLIP1P30622 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
CLIP1P30622 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC7.44□□□□□ -1.22
CLIP1P30622 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CLIP1P30622 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CLIP1P30622 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC7.44□□□□□ -1.22
CLIP1P30622 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC7.44□□□□□ -1.22
CLIP1P30622 PHACTR2P1-201ENST00000605639 1414 ntBASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms