Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
EPHA3P29320 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.39□□□□□ -1.55
EPHA3P29320 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
EPHA3P29320 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
EPHA3P29320 MTND4P10-201ENST00000446199 1363 ntBASIC5.39□□□□□ -1.55
EPHA3P29320 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.39□□□□□ -1.55
EPHA3P29320 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
EPHA3P29320 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.39□□□□□ -1.55
EPHA3P29320 ZNF876P-202ENST00000398732 1485 ntBASIC5.39□□□□□ -1.55
EPHA3P29320 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EPHA3P29320 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
EPHA3P29320 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
EPHA3P29320 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
EPHA3P29320 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EPHA3P29320 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
EPHA3P29320 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EPHA3P29320 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.38□□□□□ -1.55
EPHA3P29320 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EPHA3P29320 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EPHA3P29320 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EPHA3P29320 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
EPHA3P29320 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
EPHA3P29320 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
EPHA3P29320 RNU4-51P-201ENST00000364206 140 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EPHA3P29320 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
EPHA3P29320 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
EPHA3P29320 SNORD116-2-201ENST00000384274 95 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 SNORD116-6-201ENST00000384711 96 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.38□□□□□ -1.55
EPHA3P29320 RN7SKP278-201ENST00000410504 342 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 AC013404.1-201ENST00000413068 249 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.38□□□□□ -1.55
EPHA3P29320 TAF13P2-201ENST00000416876 286 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 GTF2IP2-201ENST00000424290 697 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 AL139158.1-201ENST00000424719 340 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 HIGD1AP12-201ENST00000427832 281 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 RPS6P15-201ENST00000431996 751 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.38□□□□□ -1.55
EPHA3P29320 MTCO1P52-201ENST00000433928 531 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 NANOGP2-201ENST00000435391 727 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.38□□□□□ -1.55
EPHA3P29320 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.38□□□□□ -1.55
EPHA3P29320 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.38□□□□□ -1.55
EPHA3P29320 AL122001.1-201ENST00000457027 370 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 RN7SL741P-201ENST00000482473 289 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 AC011037.1-201ENST00000483964 558 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 AC004815.1-201ENST00000484185 331 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.38□□□□□ -1.55
EPHA3P29320 RNA5SP340-201ENST00000517132 107 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 HMGB1P1-201ENST00000522557 636 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.38□□□□□ -1.55
EPHA3P29320 OR4A2P-201ENST00000527276 913 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.38□□□□□ -1.55
EPHA3P29320 ZNF321P-202ENST00000550843 495 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.38□□□□□ -1.55
EPHA3P29320 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.38□□□□□ -1.55
EPHA3P29320 AC069366.1-201ENST00000583159 838 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.38□□□□□ -1.55
EPHA3P29320 AC010487.1-201ENST00000594408 1172 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.38□□□□□ -1.55
EPHA3P29320 AC021171.1-201ENST00000603137 706 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 AC013444.2-201ENST00000603317 787 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 FAM27E4-201ENST00000605259 342 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 AL135786.2-201ENST00000608422 615 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.38□□□□□ -1.55
EPHA3P29320 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
EPHA3P29320 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.38□□□□□ -1.55
EPHA3P29320 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.38□□□□□ -1.55
EPHA3P29320 AP002782.1-201ENST00000623107 614 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 AP002967.1-201ENST00000624203 539 ntBASIC5.38□□□□□ -1.55
EPHA3P29320 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
EPHA3P29320 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EPHA3P29320 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
EPHA3P29320 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
EPHA3P29320 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
EPHA3P29320 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.37□□□□□ -1.55
EPHA3P29320 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.37□□□□□ -1.55
EPHA3P29320 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
EPHA3P29320 AC007842.1-201ENST00000597336 2039 ntBASIC5.37□□□□□ -1.55
EPHA3P29320 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
EPHA3P29320 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
EPHA3P29320 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.37□□□□□ -1.55
EPHA3P29320 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
EPHA3P29320 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.37□□□□□ -1.55
EPHA3P29320 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
EPHA3P29320 RNU6-666P-201ENST00000363499 107 ntBASIC5.37□□□□□ -1.55
EPHA3P29320 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.37□□□□□ -1.55
EPHA3P29320 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
EPHA3P29320 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.37□□□□□ -1.55
EPHA3P29320 AL009179.1-201ENST00000406085 265 ntBASIC5.37□□□□□ -1.55
EPHA3P29320 SLC20A1P1-201ENST00000413906 956 ntBASIC5.37□□□□□ -1.55
EPHA3P29320 HMGB1P49-201ENST00000418882 569 ntBASIC5.37□□□□□ -1.55
EPHA3P29320 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.37□□□□□ -1.55
EPHA3P29320 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.37□□□□□ -1.55
EPHA3P29320 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
EPHA3P29320 AC092170.1-201ENST00000440211 356 ntBASIC5.37□□□□□ -1.55
EPHA3P29320 HMGB3P6-201ENST00000444896 598 ntBASIC5.37□□□□□ -1.55
EPHA3P29320 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms