Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DPA1P20036 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DPA1P20036 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DPA1P20036 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DPA1P20036 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DPA1P20036 C4BPAP1-201ENST00000415474 1893 ntBASIC5.19□□□□□ -1.58
HLA-DPA1P20036 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DPA1P20036 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
HLA-DPA1P20036 MAPK10-328ENST00000641553 4009 ntBASIC5.19□□□□□ -1.58
HLA-DPA1P20036 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 OR9K1P-202ENST00000641111 3217 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AL450345.1-202ENST00000605741 3881 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 MIR320B1-201ENST00000390209 79 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AL035079.1-201ENST00000405210 287 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AC211486.3-201ENST00000412694 621 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 COX6CP13-201ENST00000428703 226 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 MTCO3P21-201ENST00000430791 643 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 CNOT7P2-201ENST00000441051 832 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 CYCSP24-201ENST00000445119 316 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AURKAPS1-201ENST00000451805 1212 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AL389915.2-201ENST00000454576 441 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AC091180.1-201ENST00000462104 372 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 RN7SL799P-201ENST00000475891 298 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AC079841.1-201ENST00000481228 950 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AC093890.1-201ENST00000502554 540 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 RNA5SP92-201ENST00000516437 110 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 HIGD1AP18-201ENST00000520730 278 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AP005432.2-201ENST00000608162 586 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 RPSAP73-201ENST00000614820 330 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.18□□□□□ -1.58
HLA-DPA1P20036 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HLA-DPA1P20036 SMG1P6-201ENST00000532337 2930 ntBASIC5.17□□□□□ -1.58
HLA-DPA1P20036 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AL512430.2-201ENST00000406786 339 ntBASIC5.17□□□□□ -1.58
HLA-DPA1P20036 RN7SKP126-201ENST00000411143 300 ntBASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AC048351.1-201ENST00000420064 602 ntBASIC5.17□□□□□ -1.58
HLA-DPA1P20036 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AL139148.1-201ENST00000427122 680 ntBASIC5.17□□□□□ -1.58
HLA-DPA1P20036 MTCYBP12-201ENST00000440559 1134 ntBASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 RPL7L1P1-201ENST00000448259 785 ntBASIC5.17□□□□□ -1.58
HLA-DPA1P20036 HMGB1P4-201ENST00000455362 567 ntBASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AC021660.1-201ENST00000465006 554 ntBASIC5.17□□□□□ -1.58
HLA-DPA1P20036 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AC005412.2-201ENST00000492004 341 ntBASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AC072052.1-201ENST00000496556 306 ntBASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms