Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 IGKV2D-10-201ENST00000520194 281 ntBASIC5.32□□□□□ -1.56
COL11A1P12107 GTF2IP11-201ENST00000526931 420 ntBASIC5.32□□□□□ -1.56
COL11A1P12107 CYCSP29-201ENST00000533731 318 ntBASIC5.32□□□□□ -1.56
COL11A1P12107 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.32□□□□□ -1.56
COL11A1P12107 AL590392.1-201ENST00000604960 446 ntBASIC5.32□□□□□ -1.56
COL11A1P12107 AP000648.2-201ENST00000624182 404 ntBASIC5.32□□□□□ -1.56
COL11A1P12107 AL445487.1-201ENST00000415694 1580 ntBASIC5.32□□□□□ -1.56
COL11A1P12107 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.32□□□□□ -1.56
COL11A1P12107 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL11A1P12107 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL11A1P12107 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL11A1P12107 AP000756.2-201ENST00000624168 2567 ntBASIC5.31□□□□□ -1.56
COL11A1P12107 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.31□□□□□ -1.56
COL11A1P12107 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL11A1P12107 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL11A1P12107 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL11A1P12107 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL11A1P12107 RN7SKP27-201ENST00000410684 333 ntBASIC5.31□□□□□ -1.56
COL11A1P12107 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.31□□□□□ -1.56
COL11A1P12107 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.31□□□□□ -1.56
COL11A1P12107 AC091153.1-201ENST00000466297 402 ntBASIC5.31□□□□□ -1.56
COL11A1P12107 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.31□□□□□ -1.56
COL11A1P12107 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.31□□□□□ -1.56
COL11A1P12107 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
COL11A1P12107 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.31□□□□□ -1.56
COL11A1P12107 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
COL11A1P12107 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.31□□□□□ -1.56
COL11A1P12107 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL11A1P12107 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL11A1P12107 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL11A1P12107 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.31□□□□□ -1.56
COL11A1P12107 AL391684.1-202ENST00000641293 1636 ntBASIC5.31□□□□□ -1.56
COL11A1P12107 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.31□□□□□ -1.56
COL11A1P12107 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL11A1P12107 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
COL11A1P12107 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.3□□□□□ -1.56
COL11A1P12107 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL11A1P12107 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL11A1P12107 AL356387.2-201ENST00000422272 243 ntBASIC5.3□□□□□ -1.56
COL11A1P12107 NFYAP1-201ENST00000431953 972 ntBASIC5.3□□□□□ -1.56
COL11A1P12107 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.3□□□□□ -1.56
COL11A1P12107 RN7SL41P-201ENST00000476144 297 ntBASIC5.3□□□□□ -1.56
COL11A1P12107 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.3□□□□□ -1.56
COL11A1P12107 PGBD4P4-201ENST00000509673 613 ntBASIC5.3□□□□□ -1.56
COL11A1P12107 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.3□□□□□ -1.56
COL11A1P12107 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.3□□□□□ -1.56
COL11A1P12107 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.3□□□□□ -1.56
COL11A1P12107 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.3□□□□□ -1.56
COL11A1P12107 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.3□□□□□ -1.56
COL11A1P12107 FRG1EP-201ENST00000634469 770 ntBASIC5.3□□□□□ -1.56
COL11A1P12107 MIR6830-201ENST00000636015 70 ntBASIC5.3□□□□□ -1.56
COL11A1P12107 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL11A1P12107 SALL4P2-201ENST00000423288 2910 ntBASIC5.3□□□□□ -1.56
COL11A1P12107 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL11A1P12107 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL11A1P12107 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.3□□□□□ -1.56
COL11A1P12107 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL11A1P12107 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL11A1P12107 AL031119.1-201ENST00000404707 1879 ntBASIC5.3□□□□□ -1.56
COL11A1P12107 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL11A1P12107 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL11A1P12107 RNU4-39P-201ENST00000362455 127 ntBASIC5.3□□□□□ -1.56
COL11A1P12107 RNA5SP509-201ENST00000364577 119 ntBASIC5.3□□□□□ -1.56
COL11A1P12107 TMSB10P2-201ENST00000416049 131 ntBASIC5.3□□□□□ -1.56
COL11A1P12107 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.3□□□□□ -1.56
COL11A1P12107 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.3□□□□□ -1.56
COL11A1P12107 EIF4HP2-201ENST00000424380 563 ntBASIC5.3□□□□□ -1.56
COL11A1P12107 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.3□□□□□ -1.56
COL11A1P12107 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.3□□□□□ -1.56
COL11A1P12107 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.3□□□□□ -1.56
COL11A1P12107 AC015914.2-201ENST00000618167 288 ntBASIC5.3□□□□□ -1.56
COL11A1P12107 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.3□□□□□ -1.56
COL11A1P12107 CASC19-206ENST00000641028 1430 ntBASIC5.29□□□□□ -1.56
COL11A1P12107 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL11A1P12107 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL11A1P12107 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COL11A1P12107 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.29□□□□□ -1.56
COL11A1P12107 ICE2P1-201ENST00000512800 1849 ntBASIC5.29□□□□□ -1.56
COL11A1P12107 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL11A1P12107 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.29□□□□□ -1.56
COL11A1P12107 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
COL11A1P12107 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL11A1P12107 MIR1193-201ENST00000408109 78 ntBASIC5.29□□□□□ -1.56
COL11A1P12107 AC104333.2-201ENST00000422630 192 ntBASIC5.29□□□□□ -1.56
COL11A1P12107 FTH1P16-201ENST00000435241 552 ntBASIC5.29□□□□□ -1.56
COL11A1P12107 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.29□□□□□ -1.56
COL11A1P12107 ACTR3P2-201ENST00000439585 1257 ntBASIC5.29□□□□□ -1.56
COL11A1P12107 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.29□□□□□ -1.56
COL11A1P12107 Y_RNA.719-201ENST00000517156 106 ntBASIC5.29□□□□□ -1.56
COL11A1P12107 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL11A1P12107 RPL23AP53-201ENST00000521854 457 ntBASIC5.29□□□□□ -1.56
COL11A1P12107 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.29□□□□□ -1.56
COL11A1P12107 AL020997.2-201ENST00000602607 184 ntBASIC5.29□□□□□ -1.56
COL11A1P12107 AL139041.1-201ENST00000605480 610 ntBASIC5.29□□□□□ -1.56
COL11A1P12107 AC090948.1-201ENST00000607464 549 ntBASIC5.29□□□□□ -1.56
COL11A1P12107 AC009120.7-201ENST00000623452 780 ntBASIC5.29□□□□□ -1.56
COL11A1P12107 AC109446.4-201ENST00000623235 2755 ntBASIC5.29□□□□□ -1.56
COL11A1P12107 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL11A1P12107 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL11A1P12107 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms