Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RNU1-32P-201ENST00000363937 159 ntBASIC4.69□□□□□ -1.66
TNFP01375 MIR141-201ENST00000384975 95 ntBASIC4.69□□□□□ -1.66
TNFP01375 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TNFP01375 GLULP6-201ENST00000399502 913 ntBASIC4.69□□□□□ -1.66
TNFP01375 RN7SKP16-201ENST00000410180 299 ntBASIC4.69□□□□□ -1.66
TNFP01375 RN7SKP267-201ENST00000410381 285 ntBASIC4.69□□□□□ -1.66
TNFP01375 AL591848.1-201ENST00000413092 322 ntBASIC4.69□□□□□ -1.66
TNFP01375 AC007738.1-201ENST00000413892 348 ntBASIC4.69□□□□□ -1.66
TNFP01375 FABP7P1-201ENST00000424004 391 ntBASIC4.69□□□□□ -1.66
TNFP01375 HMGB1P32-201ENST00000425971 565 ntBASIC4.69□□□□□ -1.66
TNFP01375 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.69□□□□□ -1.66
TNFP01375 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.69□□□□□ -1.66
TNFP01375 AC138832.1-201ENST00000522871 556 ntBASIC4.69□□□□□ -1.66
TNFP01375 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.69□□□□□ -1.66
TNFP01375 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TNFP01375 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.69□□□□□ -1.66
TNFP01375 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.69□□□□□ -1.66
TNFP01375 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.69□□□□□ -1.66
TNFP01375 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.69□□□□□ -1.66
TNFP01375 RN7SL690P-201ENST00000582087 240 ntBASIC4.69□□□□□ -1.66
TNFP01375 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.69□□□□□ -1.66
TNFP01375 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.69□□□□□ -1.66
TNFP01375 AC010503.3-201ENST00000594355 540 ntBASIC4.69□□□□□ -1.66
TNFP01375 AC019193.2-201ENST00000610012 634 ntBASIC4.69□□□□□ -1.66
TNFP01375 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.69□□□□□ -1.66
TNFP01375 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TNFP01375 AC009643.2-201ENST00000603543 1448 ntBASIC4.69□□□□□ -1.66
TNFP01375 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.69□□□□□ -1.66
TNFP01375 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
TNFP01375 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
TNFP01375 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.69□□□□□ -1.66
TNFP01375 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TNFP01375 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.68□□□□□ -1.66
TNFP01375 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TNFP01375 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.68□□□□□ -1.66
TNFP01375 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TNFP01375 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.68□□□□□ -1.66
TNFP01375 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.68□□□□□ -1.66
TNFP01375 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.68□□□□□ -1.66
TNFP01375 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TNFP01375 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TNFP01375 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TNFP01375 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
TNFP01375 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.68□□□□□ -1.66
TNFP01375 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TNFP01375 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TNFP01375 RNA5SP187-201ENST00000384400 119 ntBASIC4.68□□□□□ -1.66
TNFP01375 RNU1-82P-201ENST00000390851 165 ntBASIC4.68□□□□□ -1.66
TNFP01375 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
TNFP01375 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.68□□□□□ -1.66
TNFP01375 AC009480.2-201ENST00000422916 432 ntBASIC4.68□□□□□ -1.66
TNFP01375 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.68□□□□□ -1.66
TNFP01375 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.68□□□□□ -1.66
TNFP01375 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.68□□□□□ -1.66
TNFP01375 AC245028.2-201ENST00000458673 253 ntBASIC4.68□□□□□ -1.66
TNFP01375 snoU13.1-201ENST00000459157 104 ntBASIC4.68□□□□□ -1.66
TNFP01375 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
TNFP01375 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.68□□□□□ -1.66
TNFP01375 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TNFP01375 AC020937.1-201ENST00000519677 1013 ntBASIC4.68□□□□□ -1.66
TNFP01375 RPL23AP53-201ENST00000521854 457 ntBASIC4.68□□□□□ -1.66
TNFP01375 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TNFP01375 OR5M2P-201ENST00000529003 936 ntBASIC4.68□□□□□ -1.66
TNFP01375 AL110118.1-201ENST00000553543 400 ntBASIC4.68□□□□□ -1.66
TNFP01375 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.68□□□□□ -1.66
TNFP01375 AC068790.7-201ENST00000602347 528 ntBASIC4.68□□□□□ -1.66
TNFP01375 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.68□□□□□ -1.66
TNFP01375 OR51C1P-201ENST00000608504 942 ntBASIC4.68□□□□□ -1.66
TNFP01375 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.68□□□□□ -1.66
TNFP01375 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.68□□□□□ -1.66
TNFP01375 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.68□□□□□ -1.66
TNFP01375 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TNFP01375 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TNFP01375 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.68□□□□□ -1.66
TNFP01375 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TNFP01375 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
TNFP01375 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.68□□□□□ -1.66
TNFP01375 ZFRP1-201ENST00000457579 2970 ntBASIC4.68□□□□□ -1.66
TNFP01375 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TNFP01375 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TNFP01375 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.67□□□□□ -1.66
TNFP01375 DHX40P1-201ENST00000588725 1412 ntBASIC4.67□□□□□ -1.66
TNFP01375 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TNFP01375 AC017079.1-201ENST00000333650 415 ntBASIC4.67□□□□□ -1.66
TNFP01375 RNA5SP332-201ENST00000391063 115 ntBASIC4.67□□□□□ -1.66
TNFP01375 AL049697.2-201ENST00000403708 294 ntBASIC4.67□□□□□ -1.66
TNFP01375 AL645608.4-201ENST00000423619 154 ntBASIC4.67□□□□□ -1.66
TNFP01375 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.67□□□□□ -1.66
TNFP01375 NIPA2P1-201ENST00000426223 976 ntBASIC4.67□□□□□ -1.66
TNFP01375 HMGN2P27-201ENST00000427352 270 ntBASIC4.67□□□□□ -1.66
TNFP01375 CYCSP11-201ENST00000436426 315 ntBASIC4.67□□□□□ -1.66
TNFP01375 RPL35AP21-201ENST00000437667 333 ntBASIC4.67□□□□□ -1.66
TNFP01375 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.67□□□□□ -1.66
TNFP01375 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.67□□□□□ -1.66
TNFP01375 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.67□□□□□ -1.66
TNFP01375 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.67□□□□□ -1.66
TNFP01375 RPL5P22-201ENST00000480199 884 ntBASIC4.67□□□□□ -1.66
TNFP01375 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.67□□□□□ -1.66
TNFP01375 MORF4L2P1-201ENST00000503761 858 ntBASIC4.67□□□□□ -1.66
TNFP01375 AK3P4-201ENST00000504283 583 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms