Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 OR7E94P-202ENST00000601375 790 ntBASIC7.99□□□□□ -1.13
RNF40O75150 NDUFB9P1-201ENST00000604683 510 ntBASIC7.99□□□□□ -1.13
RNF40O75150 MIR7162-201ENST00000611134 69 ntBASIC7.99□□□□□ -1.13
RNF40O75150 RNVU1-19-201ENST00000613023 167 ntBASIC7.99□□□□□ -1.13
RNF40O75150 AC234782.5-201ENST00000617723 324 ntBASIC7.99□□□□□ -1.13
RNF40O75150 Z69720.2-201ENST00000624755 279 ntBASIC7.99□□□□□ -1.13
RNF40O75150 AC012557.3-201ENST00000626439 255 ntBASIC7.99□□□□□ -1.13
RNF40O75150 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
RNF40O75150 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RNF40O75150 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
RNF40O75150 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC7.99□□□□□ -1.13
RNF40O75150 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.99□□□□□ -1.13
RNF40O75150 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RNF40O75150 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
RNF40O75150 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
RNF40O75150 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RNF40O75150 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.99□□□□□ -1.13
RNF40O75150 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
RNF40O75150 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RNF40O75150 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RNF40O75150 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RNF40O75150 AC104118.1-201ENST00000607625 1589 ntBASIC7.98□□□□□ -1.13
RNF40O75150 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RNF40O75150 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RNF40O75150 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RNF40O75150 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RNF40O75150 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RNF40O75150 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RNF40O75150 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
RNF40O75150 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
RNF40O75150 RNA5SP448-201ENST00000363151 111 ntBASIC7.98□□□□□ -1.13
RNF40O75150 AL450124.1-201ENST00000376401 353 ntBASIC7.98□□□□□ -1.13
RNF40O75150 AC117470.1-201ENST00000381974 330 ntBASIC7.98□□□□□ -1.13
RNF40O75150 AL353151.1-201ENST00000402406 604 ntBASIC7.98□□□□□ -1.13
RNF40O75150 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC7.98□□□□□ -1.13
RNF40O75150 FDPSP6-201ENST00000425091 512 ntBASIC7.98□□□□□ -1.13
RNF40O75150 NIPA2P1-201ENST00000426223 976 ntBASIC7.98□□□□□ -1.13
RNF40O75150 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.98□□□□□ -1.13
RNF40O75150 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.98□□□□□ -1.13
RNF40O75150 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC7.98□□□□□ -1.13
RNF40O75150 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC7.98□□□□□ -1.13
RNF40O75150 SLC31A1P1-201ENST00000451221 567 ntBASIC7.98□□□□□ -1.13
RNF40O75150 RPL26P30-201ENST00000453533 435 ntBASIC7.98□□□□□ -1.13
RNF40O75150 BX248409.1-201ENST00000455497 255 ntBASIC7.98□□□□□ -1.13
RNF40O75150 MED28P7-201ENST00000456611 530 ntBASIC7.98□□□□□ -1.13
RNF40O75150 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC7.98□□□□□ -1.13
RNF40O75150 COX6B1P4-201ENST00000519826 484 ntBASIC7.98□□□□□ -1.13
RNF40O75150 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC7.98□□□□□ -1.13
RNF40O75150 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC7.98□□□□□ -1.13
RNF40O75150 PCNAP4-201ENST00000532690 730 ntBASIC7.98□□□□□ -1.13
RNF40O75150 AC027544.3-201ENST00000535082 757 ntBASIC7.98□□□□□ -1.13
RNF40O75150 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.98□□□□□ -1.13
RNF40O75150 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC7.98□□□□□ -1.13
RNF40O75150 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC7.98□□□□□ -1.13
RNF40O75150 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC7.98□□□□□ -1.13
RNF40O75150 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.98□□□□□ -1.13
RNF40O75150 AC024085.1-201ENST00000604299 432 ntBASIC7.98□□□□□ -1.13
RNF40O75150 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC7.98□□□□□ -1.13
RNF40O75150 AL606760.4-201ENST00000617613 718 ntBASIC7.98□□□□□ -1.13
RNF40O75150 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC7.98□□□□□ -1.13
RNF40O75150 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.98□□□□□ -1.13
RNF40O75150 TEX41-279ENST00000629149 609 ntTSL 5 BASIC7.98□□□□□ -1.13
RNF40O75150 AC099654.15-201ENST00000639802 509 ntBASIC7.98□□□□□ -1.13
RNF40O75150 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RNF40O75150 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7.98□□□□□ -1.13
RNF40O75150 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.98□□□□□ -1.13
RNF40O75150 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RNF40O75150 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
RNF40O75150 AC125603.4-201ENST00000621942 2699 ntBASIC7.98□□□□□ -1.13
RNF40O75150 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RNF40O75150 AC092447.10-201ENST00000620607 1652 ntBASIC7.98□□□□□ -1.13
RNF40O75150 ASNSP1-204ENST00000641977 1664 ntBASIC7.98□□□□□ -1.13
RNF40O75150 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
RNF40O75150 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RNF40O75150 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RNF40O75150 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.98□□□□□ -1.13
RNF40O75150 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
RNF40O75150 AC104083.1-201ENST00000569449 2615 ntBASIC7.98□□□□□ -1.13
RNF40O75150 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RNF40O75150 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
RNF40O75150 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.98□□□□□ -1.13
RNF40O75150 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RNF40O75150 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.97□□□□□ -1.13
RNF40O75150 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
RNF40O75150 MTCO1P14-201ENST00000441695 1559 ntBASIC7.97□□□□□ -1.13
RNF40O75150 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.97□□□□□ -1.13
RNF40O75150 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RNF40O75150 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
RNF40O75150 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.97□□□□□ -1.13
RNF40O75150 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF40O75150 PRNCR1-201ENST00000635449 12727 ntBASIC7.97□□□□□ -1.13
RNF40O75150 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
RNF40O75150 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.97□□□□□ -1.13
RNF40O75150 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF40O75150 RNA5SP389-201ENST00000362610 115 ntBASIC7.97□□□□□ -1.13
RNF40O75150 RNA5SP226-201ENST00000362653 115 ntBASIC7.97□□□□□ -1.13
RNF40O75150 Y_RNA.148-201ENST00000363557 117 ntBASIC7.97□□□□□ -1.13
RNF40O75150 Y_RNA.307-201ENST00000365022 117 ntBASIC7.97□□□□□ -1.13
RNF40O75150 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RNF40O75150 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms