Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.62□□□□□ -1.51
PHGDHO43175 AC074255.1-201ENST00000511259 501 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 Y_RNA.667-201ENST00000516212 107 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 RNA5SP438-201ENST00000516561 112 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.62□□□□□ -1.51
PHGDHO43175 HMGN2P36-201ENST00000529541 409 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 EIF4A2P5-201ENST00000529914 499 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 AC124293.1-201ENST00000530034 493 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PHGDHO43175 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.62□□□□□ -1.51
PHGDHO43175 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.62□□□□□ -1.51
PHGDHO43175 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.62□□□□□ -1.51
PHGDHO43175 AC023813.2-201ENST00000564321 469 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 AC009962.1-201ENST00000567327 3813 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 AC019322.1-201ENST00000571869 389 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.62□□□□□ -1.51
PHGDHO43175 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.62□□□□□ -1.51
PHGDHO43175 EIF1P6-201ENST00000600054 334 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 AC018809.2-201ENST00000602436 3823 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 AC025588.2-201ENST00000604851 466 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 BNIP3P4-201ENST00000604946 565 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 AL445423.1-201ENST00000609941 536 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.62□□□□□ -1.51
PHGDHO43175 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 MIR7109-201ENST00000613748 65 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 MIR6133-201ENST00000617057 108 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 uc_338.9-201ENST00000617424 182 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 U6.48-201ENST00000618523 106 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 VN1R7P-201ENST00000619242 903 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 MIR6806-201ENST00000622141 64 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 AP002782.1-201ENST00000623107 614 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PHGDHO43175 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.62□□□□□ -1.51
PHGDHO43175 ZNF663P-202ENST00000641770 1131 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHGDHO43175 MTCO1P6-201ENST00000481192 1384 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 MTND4P8-201ENST00000514997 1362 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHGDHO43175 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PHGDHO43175 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHGDHO43175 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PHGDHO43175 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHGDHO43175 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.62□□□□□ -1.51
PHGDHO43175 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.62□□□□□ -1.51
PHGDHO43175 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHGDHO43175 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PHGDHO43175 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PHGDHO43175 PWAR1-201ENST00000624188 2414 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.61□□□□□ -1.51
PHGDHO43175 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.61□□□□□ -1.51
PHGDHO43175 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
PHGDHO43175 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
PHGDHO43175 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PHGDHO43175 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.61□□□□□ -1.51
PHGDHO43175 RNA5SP477-201ENST00000362639 119 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 RNU1-87P-201ENST00000363727 170 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PHGDHO43175 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PHGDHO43175 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PHGDHO43175 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PHGDHO43175 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PHGDHO43175 MTCO2P31-201ENST00000402702 684 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 RPS6P23-201ENST00000413224 722 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.61□□□□□ -1.51
PHGDHO43175 HMGB1P49-201ENST00000418882 569 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.61□□□□□ -1.51
PHGDHO43175 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.61□□□□□ -1.51
PHGDHO43175 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PHGDHO43175 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.61□□□□□ -1.51
PHGDHO43175 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.61□□□□□ -1.51
PHGDHO43175 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.61□□□□□ -1.51
PHGDHO43175 PCBP2P1-201ENST00000437262 977 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.61□□□□□ -1.51
PHGDHO43175 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.61□□□□□ -1.51
PHGDHO43175 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.61□□□□□ -1.51
PHGDHO43175 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PHGDHO43175 MTCYBP11-201ENST00000447254 1109 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.61□□□□□ -1.51
PHGDHO43175 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.61□□□□□ -1.51
PHGDHO43175 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PHGDHO43175 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PHGDHO43175 RPL23AP44-201ENST00000482216 473 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 AC011037.1-201ENST00000483964 558 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 AC009120.1-201ENST00000493458 473 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.61□□□□□ -1.51
PHGDHO43175 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.61□□□□□ -1.51
PHGDHO43175 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.61□□□□□ -1.51
PHGDHO43175 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.61□□□□□ -1.51
PHGDHO43175 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.61□□□□□ -1.51
PHGDHO43175 OR5H7P-201ENST00000514084 930 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 SCARNA6.1-201ENST00000516989 238 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 IGLV3-24-201ENST00000517477 197 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.61□□□□□ -1.51
PHGDHO43175 MTATP6P15-201ENST00000527233 835 ntBASIC5.61□□□□□ -1.51
PHGDHO43175 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.61□□□□□ -1.51
PHGDHO43175 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PHGDHO43175 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms