Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC087783.2-201ENST00000605070 562 ntBASIC5.37□□□□□ -1.55
CLDN3O15551 BX005214.3-202ENST00000619809 325 ntBASIC5.37□□□□□ -1.55
CLDN3O15551 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN3O15551 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN3O15551 SYT14P1-202ENST00000600441 1448 ntBASIC5.37□□□□□ -1.55
CLDN3O15551 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN3O15551 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN3O15551 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN3O15551 AC068446.1-201ENST00000556425 1549 ntBASIC5.37□□□□□ -1.55
CLDN3O15551 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN3O15551 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN3O15551 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CLDN3O15551 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CLDN3O15551 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN3O15551 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN3O15551 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.36□□□□□ -1.55
CLDN3O15551 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN3O15551 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN3O15551 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN3O15551 CTSL3P-202ENST00000412179 788 ntBASIC5.36□□□□□ -1.55
CLDN3O15551 AC007738.1-201ENST00000413892 348 ntBASIC5.36□□□□□ -1.55
CLDN3O15551 AC016769.2-201ENST00000414815 475 ntBASIC5.36□□□□□ -1.55
CLDN3O15551 TBCAP2-201ENST00000416175 326 ntBASIC5.36□□□□□ -1.55
CLDN3O15551 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN3O15551 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN3O15551 AC012512.1-201ENST00000446594 718 ntBASIC5.36□□□□□ -1.55
CLDN3O15551 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDN3O15551 AC073073.1-201ENST00000493920 463 ntBASIC5.36□□□□□ -1.55
CLDN3O15551 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN3O15551 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN3O15551 MORF4L1P3-201ENST00000525966 950 ntBASIC5.36□□□□□ -1.55
CLDN3O15551 AGGF1P9-201ENST00000561884 913 ntBASIC5.36□□□□□ -1.55
CLDN3O15551 AC009852.2-201ENST00000567898 485 ntBASIC5.36□□□□□ -1.55
CLDN3O15551 SNORD39.2-201ENST00000579995 76 ntBASIC5.36□□□□□ -1.55
CLDN3O15551 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDN3O15551 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDN3O15551 AC008536.1-201ENST00000602872 669 ntBASIC5.36□□□□□ -1.55
CLDN3O15551 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
CLDN3O15551 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
CLDN3O15551 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN3O15551 SAMMSON-213ENST00000641336 1521 ntBASIC5.36□□□□□ -1.55
CLDN3O15551 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
CLDN3O15551 AC097461.1-201ENST00000568928 2821 ntBASIC5.36□□□□□ -1.55
CLDN3O15551 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN3O15551 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN3O15551 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN3O15551 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN3O15551 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN3O15551 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN3O15551 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN3O15551 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CLDN3O15551 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN3O15551 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.35□□□□□ -1.55
CLDN3O15551 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN3O15551 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN3O15551 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.35□□□□□ -1.55
CLDN3O15551 SAMMSON-226ENST00000642089 1582 ntBASIC5.35□□□□□ -1.55
CLDN3O15551 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CLDN3O15551 AC017079.1-201ENST00000333650 415 ntBASIC5.35□□□□□ -1.55
CLDN3O15551 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN3O15551 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.35□□□□□ -1.55
CLDN3O15551 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN3O15551 AL357515.1-201ENST00000402967 542 ntBASIC5.35□□□□□ -1.55
CLDN3O15551 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDN3O15551 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDN3O15551 SETP10-201ENST00000424368 814 ntBASIC5.35□□□□□ -1.55
CLDN3O15551 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN3O15551 AC007559.1-201ENST00000428736 355 ntBASIC5.35□□□□□ -1.55
CLDN3O15551 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.35□□□□□ -1.55
CLDN3O15551 AL772161.1-201ENST00000439130 476 ntBASIC5.35□□□□□ -1.55
CLDN3O15551 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN3O15551 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN3O15551 MTND4LP12-201ENST00000448237 295 ntBASIC5.35□□□□□ -1.55
CLDN3O15551 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDN3O15551 SBDSP1-204ENST00000453858 737 ntBASIC5.35□□□□□ -1.55
CLDN3O15551 RPL35AP28-201ENST00000459730 331 ntBASIC5.35□□□□□ -1.55
CLDN3O15551 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN3O15551 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN3O15551 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDN3O15551 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN3O15551 AP000919.1-201ENST00000582850 985 ntBASIC5.35□□□□□ -1.55
CLDN3O15551 AL031320.1-201ENST00000604177 357 ntBASIC5.35□□□□□ -1.55
CLDN3O15551 Mico1.1-201ENST00000611698 204 ntBASIC5.35□□□□□ -1.55
CLDN3O15551 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN3O15551 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.35□□□□□ -1.55
CLDN3O15551 AP001784.1-201ENST00000624107 428 ntBASIC5.35□□□□□ -1.55
CLDN3O15551 CR381572.2-201ENST00000624852 397 ntBASIC5.35□□□□□ -1.55
CLDN3O15551 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN3O15551 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN3O15551 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN3O15551 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN3O15551 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CLDN3O15551 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN3O15551 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.34□□□□□ -1.55
CLDN3O15551 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN3O15551 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN3O15551 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN3O15551 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN3O15551 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN3O15551 TCP11X1-202ENST00000622971 1372 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms