Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC8.3□□□□□ -1.08
CUX2O14529 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC8.3□□□□□ -1.08
CUX2O14529 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC8.3□□□□□ -1.08
CUX2O14529 RN7SL176P-201ENST00000580352 264 ntBASIC8.3□□□□□ -1.08
CUX2O14529 MIR4286-201ENST00000580651 93 ntBASIC8.3□□□□□ -1.08
CUX2O14529 ZNF415P1-201ENST00000582279 1166 ntBASIC8.3□□□□□ -1.08
CUX2O14529 AC010632.3-201ENST00000611377 369 ntBASIC8.3□□□□□ -1.08
CUX2O14529 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC8.3□□□□□ -1.08
CUX2O14529 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CUX2O14529 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CUX2O14529 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CUX2O14529 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC8.3□□□□□ -1.08
CUX2O14529 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC8.29□□□□□ -1.08
CUX2O14529 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CUX2O14529 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
CUX2O14529 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CUX2O14529 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
CUX2O14529 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CUX2O14529 AL136231.1-201ENST00000429407 730 ntBASIC8.29□□□□□ -1.08
CUX2O14529 AC005412.2-201ENST00000492004 341 ntBASIC8.29□□□□□ -1.08
CUX2O14529 AL132838.2-201ENST00000492041 314 ntBASIC8.29□□□□□ -1.08
CUX2O14529 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC8.29□□□□□ -1.08
CUX2O14529 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CUX2O14529 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC8.29□□□□□ -1.08
CUX2O14529 UBA2-208ENST00000592791 910 ntTSL 2 BASIC8.29□□□□□ -1.08
CUX2O14529 AC007497.1-201ENST00000610421 561 ntBASIC8.29□□□□□ -1.08
CUX2O14529 MIR6133-201ENST00000617057 108 ntBASIC8.29□□□□□ -1.08
CUX2O14529 AC090506.2-201ENST00000624521 419 ntBASIC8.29□□□□□ -1.08
CUX2O14529 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CUX2O14529 AC133552.1-201ENST00000569988 4007 ntBASIC8.29□□□□□ -1.08
CUX2O14529 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
CUX2O14529 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
CUX2O14529 UGT2B26P-201ENST00000508672 1613 ntBASIC8.28□□□□□ -1.08
CUX2O14529 RNA5SP283-201ENST00000365604 119 ntBASIC8.28□□□□□ -1.08
CUX2O14529 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
CUX2O14529 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC8.28□□□□□ -1.08
CUX2O14529 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC8.28□□□□□ -1.08
CUX2O14529 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CUX2O14529 AC022133.1-201ENST00000490961 571 ntBASIC8.28□□□□□ -1.08
CUX2O14529 RN7SL810P-201ENST00000493031 276 ntBASIC8.28□□□□□ -1.08
CUX2O14529 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC8.28□□□□□ -1.08
CUX2O14529 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC8.28□□□□□ -1.08
CUX2O14529 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC8.28□□□□□ -1.08
CUX2O14529 ECM1P2-201ENST00000503354 1577 ntBASIC8.28□□□□□ -1.08
CUX2O14529 AC025574.1-201ENST00000554784 1653 ntBASIC8.28□□□□□ -1.08
CUX2O14529 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC8.28□□□□□ -1.08
CUX2O14529 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
CUX2O14529 AL035425.3-201ENST00000564206 4996 ntBASIC8.28□□□□□ -1.08
CUX2O14529 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
CUX2O14529 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CUX2O14529 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CUX2O14529 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CUX2O14529 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC8.28□□□□□ -1.08
CUX2O14529 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CUX2O14529 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.08
CUX2O14529 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CUX2O14529 AC092681.1-201ENST00000297369 291 ntBASIC8.27□□□□□ -1.09
CUX2O14529 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC8.27□□□□□ -1.09
CUX2O14529 HSFY1P1-201ENST00000423928 1178 ntBASIC8.27□□□□□ -1.09
CUX2O14529 RPS3AP54-201ENST00000435535 734 ntBASIC8.27□□□□□ -1.09
CUX2O14529 AC090804.1-201ENST00000448870 490 ntBASIC8.27□□□□□ -1.09
CUX2O14529 EIF4A2P4-201ENST00000458691 1196 ntBASIC8.27□□□□□ -1.09
CUX2O14529 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC8.27□□□□□ -1.09
CUX2O14529 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC8.27□□□□□ -1.09
CUX2O14529 PSMB7P1-201ENST00000556349 514 ntBASIC8.27□□□□□ -1.09
CUX2O14529 AC096577.2-201ENST00000611455 153 ntBASIC8.27□□□□□ -1.09
CUX2O14529 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC8.27□□□□□ -1.09
CUX2O14529 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CUX2O14529 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CUX2O14529 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CUX2O14529 SNORA48.4-201ENST00000391089 134 ntBASIC8.26□□□□□ -1.09
CUX2O14529 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC8.26□□□□□ -1.09
CUX2O14529 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC8.26□□□□□ -1.09
CUX2O14529 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC8.26□□□□□ -1.09
CUX2O14529 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC8.26□□□□□ -1.09
CUX2O14529 NDUFA5P1-201ENST00000433858 341 ntBASIC8.26□□□□□ -1.09
CUX2O14529 RPL21P89-201ENST00000444021 467 ntBASIC8.26□□□□□ -1.09
CUX2O14529 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC8.26□□□□□ -1.09
CUX2O14529 ANK3-207ENST00000460468 677 ntTSL 3 BASIC8.26□□□□□ -1.09
CUX2O14529 RPS17P2-201ENST00000461663 408 ntBASIC8.26□□□□□ -1.09
CUX2O14529 IGLVIV-65-201ENST00000517313 360 ntBASIC8.26□□□□□ -1.09
CUX2O14529 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC8.26□□□□□ -1.09
CUX2O14529 AC087821.1-201ENST00000623639 567 ntBASIC8.26□□□□□ -1.09
CUX2O14529 MIR3653-201ENST00000625572 110 ntBASIC8.26□□□□□ -1.09
CUX2O14529 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
CUX2O14529 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC8.26□□□□□ -1.09
CUX2O14529 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC8.26□□□□□ -1.09
CUX2O14529 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC8.26□□□□□ -1.09
CUX2O14529 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CUX2O14529 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC8.26□□□□□ -1.09
CUX2O14529 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CUX2O14529 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CUX2O14529 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CUX2O14529 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CUX2O14529 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CUX2O14529 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CUX2O14529 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CUX2O14529 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CUX2O14529 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CUX2O14529 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms