Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
FOXN3O00409 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.83□□□□□ -1.48
FOXN3O00409 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FOXN3O00409 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXN3O00409 ZNF29P-201ENST00000225587 168 ntBASIC5.83□□□□□ -1.48
FOXN3O00409 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXN3O00409 RNU4-2-201ENST00000365668 141 ntBASIC5.83□□□□□ -1.48
FOXN3O00409 RPS3AP25-201ENST00000411660 793 ntBASIC5.83□□□□□ -1.48
FOXN3O00409 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXN3O00409 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.83□□□□□ -1.48
FOXN3O00409 AC246680.2-201ENST00000422106 389 ntBASIC5.83□□□□□ -1.48
FOXN3O00409 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.83□□□□□ -1.48
FOXN3O00409 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FOXN3O00409 AC000041.1-201ENST00000439655 175 ntBASIC5.83□□□□□ -1.48
FOXN3O00409 AL353093.1-201ENST00000441292 436 ntBASIC5.83□□□□□ -1.48
FOXN3O00409 RPS10P18-201ENST00000442662 495 ntBASIC5.83□□□□□ -1.48
FOXN3O00409 HSFY3P-201ENST00000444242 1191 ntBASIC5.83□□□□□ -1.48
FOXN3O00409 TRY2P-201ENST00000448860 689 ntBASIC5.83□□□□□ -1.48
FOXN3O00409 RPL7P45-201ENST00000455851 743 ntBASIC5.83□□□□□ -1.48
FOXN3O00409 AL133244.1-201ENST00000456007 258 ntBASIC5.83□□□□□ -1.48
FOXN3O00409 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.83□□□□□ -1.48
FOXN3O00409 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.83□□□□□ -1.48
FOXN3O00409 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXN3O00409 HMGN1P9-201ENST00000515212 298 ntBASIC5.83□□□□□ -1.48
FOXN3O00409 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXN3O00409 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.83□□□□□ -1.48
FOXN3O00409 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
FOXN3O00409 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.83□□□□□ -1.48
FOXN3O00409 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.83□□□□□ -1.48
FOXN3O00409 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.83□□□□□ -1.48
FOXN3O00409 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.83□□□□□ -1.48
FOXN3O00409 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.83□□□□□ -1.48
FOXN3O00409 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FOXN3O00409 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.83□□□□□ -1.48
FOXN3O00409 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXN3O00409 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXN3O00409 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
FOXN3O00409 AC002069.2-201ENST00000603580 883 ntBASIC5.83□□□□□ -1.48
FOXN3O00409 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FOXN3O00409 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXN3O00409 MIR6778-201ENST00000617912 73 ntBASIC5.83□□□□□ -1.48
FOXN3O00409 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.83□□□□□ -1.48
FOXN3O00409 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXN3O00409 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXN3O00409 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FOXN3O00409 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FOXN3O00409 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FOXN3O00409 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
FOXN3O00409 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXN3O00409 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXN3O00409 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
FOXN3O00409 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXN3O00409 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FOXN3O00409 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FOXN3O00409 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.82□□□□□ -1.48
FOXN3O00409 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.82□□□□□ -1.48
FOXN3O00409 CASC19-248ENST00000641674 1356 ntBASIC5.82□□□□□ -1.48
FOXN3O00409 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
FOXN3O00409 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
FOXN3O00409 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXN3O00409 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
FOXN3O00409 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FOXN3O00409 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
FOXN3O00409 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FOXN3O00409 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FOXN3O00409 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.82□□□□□ -1.48
FOXN3O00409 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FOXN3O00409 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.82□□□□□ -1.48
FOXN3O00409 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.82□□□□□ -1.48
FOXN3O00409 HMGN1P36-201ENST00000446623 298 ntBASIC5.82□□□□□ -1.48
FOXN3O00409 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.82□□□□□ -1.48
FOXN3O00409 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.82□□□□□ -1.48
FOXN3O00409 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.82□□□□□ -1.48
FOXN3O00409 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.82□□□□□ -1.48
FOXN3O00409 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.82□□□□□ -1.48
FOXN3O00409 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.82□□□□□ -1.48
FOXN3O00409 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FOXN3O00409 AL035407.2-201ENST00000454090 378 ntBASIC5.82□□□□□ -1.48
FOXN3O00409 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXN3O00409 AC104687.1-201ENST00000485829 412 ntBASIC5.82□□□□□ -1.48
FOXN3O00409 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.82□□□□□ -1.48
FOXN3O00409 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.82□□□□□ -1.48
FOXN3O00409 MTND6P2-201ENST00000512226 524 ntBASIC5.82□□□□□ -1.48
FOXN3O00409 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.82□□□□□ -1.48
FOXN3O00409 AC092709.1-201ENST00000521355 1045 ntBASIC5.82□□□□□ -1.48
FOXN3O00409 AC112191.2-201ENST00000522428 333 ntBASIC5.82□□□□□ -1.48
FOXN3O00409 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.82□□□□□ -1.48
FOXN3O00409 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.82□□□□□ -1.48
FOXN3O00409 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.82□□□□□ -1.48
FOXN3O00409 AGGF1P5-201ENST00000567900 919 ntBASIC5.82□□□□□ -1.48
FOXN3O00409 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.82□□□□□ -1.48
FOXN3O00409 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.82□□□□□ -1.48
FOXN3O00409 AC124856.1-201ENST00000600819 896 ntBASIC5.82□□□□□ -1.48
FOXN3O00409 AC068313.1-201ENST00000604028 1008 ntBASIC5.82□□□□□ -1.48
FOXN3O00409 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.82□□□□□ -1.48
FOXN3O00409 AL078595.3-201ENST00000623815 1166 ntBASIC5.82□□□□□ -1.48
FOXN3O00409 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.82□□□□□ -1.48
FOXN3O00409 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.82□□□□□ -1.48
FOXN3O00409 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
FOXN3O00409 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms