Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 UBE2CP4-201ENST00000561405 535 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AC127024.5-201ENST00000580085 462 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AC112191.3-201ENST00000604371 277 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AC010200.2-201ENST00000605098 235 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AL020991.1-201ENST00000612314 373 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 SNORA16A-202ENST00000628458 135 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 JAML-213ENST00000640745 951 ntTSL 5 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 GOT2P1-201ENST00000440922 1309 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AL512329.1-201ENST00000404600 1592 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AL137918.1-201ENST00000624542 1922 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AC090220.1-201ENST00000593078 1699 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 Y_RNA.89-201ENST00000363031 102 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 RNU12-2P-201ENST00000364789 156 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 RNU6-534P-201ENST00000364877 106 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 SNORD15A-201ENST00000384214 148 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 SNORA70.9-201ENST00000384370 135 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AL139128.1-201ENST00000413921 941 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 NUP35P2-201ENST00000416748 943 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AC073464.1-201ENST00000429823 534 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 FTLP17-201ENST00000432567 525 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 RPS21P1-201ENST00000434479 247 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 TXNP5-201ENST00000441043 315 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AL512605.1-202ENST00000441919 381 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AL591379.2-201ENST00000450223 397 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 RPL7P17-201ENST00000470927 724 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AC091982.1-202ENST00000473923 343 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 MARK2P8-201ENST00000476069 952 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 RN7SL165P-201ENST00000477476 291 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 RPL23AP80-201ENST00000495605 424 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AC097173.1-201ENST00000505862 819 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 ARL4AP2-201ENST00000507378 601 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AF131216.2-201ENST00000512316 564 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 MTCO1P35-201ENST00000515270 228 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 RNU6-583P-201ENST00000516012 92 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 OR5D2P-201ENST00000524390 911 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 OR5AP1P-201ENST00000529730 940 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 PHBP2-201ENST00000532859 806 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 OR8L1P-201ENST00000534005 955 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms