Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 OR55B1P-203ENST00000641518 2602 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AC063976.2-201ENST00000425667 3556 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 THAP12P5-201ENST00000405864 2275 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AC092747.4-201ENST00000620519 1861 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 RNA5SP90-201ENST00000364801 99 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 RNU1-74P-201ENST00000384108 171 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 RNU6-1005P-201ENST00000384519 107 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 SDHDP6-201ENST00000414693 480 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 PTP4A1P1-201ENST00000420539 515 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 KCTD9P1-201ENST00000430462 1167 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AL161636.2-201ENST00000445179 927 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AC002075.1-201ENST00000457396 676 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 RN7SL273P-201ENST00000481561 299 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 RPS3AP6-201ENST00000484430 795 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 RN7SL547P-201ENST00000490793 290 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AC010374.1-201ENST00000503762 1237 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AC025459.1-201ENST00000504072 156 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 SNORA70.11-201ENST00000515987 138 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 SNORA70.13-201ENST00000516116 138 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AC026407.1-201ENST00000518369 204 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AC126177.5-201ENST00000549599 178 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 SNORD39.2-201ENST00000579995 76 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 MIR3614-201ENST00000581261 86 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 RPP40P2-201ENST00000603596 712 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AC127024.6-201ENST00000621598 424 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 MIR8080-201ENST00000622224 89 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 CYP4F35P-202ENST00000636121 390 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AL731532.2-201ENST00000623542 1953 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 CASC19-248ENST00000641674 1356 ntBASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV7S3A2A0A539 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 U3.3-201ENST00000362986 216 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 AL031985.1-201ENST00000392713 418 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 AL035079.1-201ENST00000405210 287 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 EIF4A1P1-201ENST00000420241 934 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 EI24P4-201ENST00000423683 1078 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 CYCSP12-201ENST00000437729 300 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 AC069540.1-201ENST00000446320 988 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 RPL7P45-201ENST00000455851 743 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 RPS27AP2-201ENST00000457576 465 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms