Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 RPL34P3-201ENST00000421454 338 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 RPS26P2-201ENST00000440331 348 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 PCNPP2-201ENST00000441651 455 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AC044810.1-201ENST00000480271 711 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 UBA52P3-201ENST00000491303 382 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 MTCYBP19-201ENST00000517463 1124 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 NPM1P35-201ENST00000533043 868 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AC084373.1-201ENST00000603311 235 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 RPL23AP61-201ENST00000623642 466 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AC019080.5-201ENST00000624891 757 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 MTND4P26-201ENST00000415971 1359 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 KPNA2P2-201ENST00000419546 1489 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AC092747.4-201ENST00000620519 1861 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AC018529.3-201ENST00000624212 2254 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 RNA5SP433-201ENST00000364491 114 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AC019155.1-201ENST00000382242 574 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 RNA5SP146-201ENST00000410743 123 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AL590806.1-201ENST00000415818 853 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AL356806.1-201ENST00000422524 916 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AL662874.1-201ENST00000426065 230 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 NDUFA5P1-201ENST00000433858 341 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 Z99127.2-201ENST00000441426 334 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 EEF1B2P3-201ENST00000447718 678 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AL445665.1-202ENST00000452436 324 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AC133473.1-201ENST00000455173 299 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 RN7SL51P-201ENST00000468230 285 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 PPM1AP1-201ENST00000502740 1135 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 HAUS1P1-201ENST00000505275 832 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 CYCSP22-201ENST00000517555 339 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 HMGB1P40-201ENST00000525121 540 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 GLRXP2-201ENST00000555594 321 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AC026826.3-201ENST00000561747 158 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AC116553.2-201ENST00000564203 463 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 CYCSP40-201ENST00000575927 294 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 AC007204.1-201ENST00000621794 555 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 MIR193BHG-214ENST00000641765 509 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms