Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 RNU2-46P-201ENST00000517038 113 ntBASIC9.44□□□□□ -0.9
PHF8Q9UPP1 SNRPCP6-201ENST00000528310 210 ntBASIC9.44□□□□□ -0.9
PHF8Q9UPP1 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 AL109918.3-201ENST00000603072 338 ntBASIC9.44□□□□□ -0.9
PHF8Q9UPP1 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 HMGB1P24-202ENST00000615653 685 ntBASIC9.44□□□□□ -0.9
PHF8Q9UPP1 AP003789.1-201ENST00000617737 605 ntBASIC9.44□□□□□ -0.9
PHF8Q9UPP1 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 AL356585.4-201ENST00000623078 1229 ntBASIC9.44□□□□□ -0.9
PHF8Q9UPP1 AC005618.4-201ENST00000625053 554 ntBASIC9.44□□□□□ -0.9
PHF8Q9UPP1 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 CDY7P-201ENST00000429883 1604 ntBASIC9.44□□□□□ -0.9
PHF8Q9UPP1 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 MED6-212ENST00000615788 1700 ntTSL 5 BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PHF8Q9UPP1 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 NMD3P1-201ENST00000439704 1488 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AL672167.2-201ENST00000377164 879 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 RNU6-809P-201ENST00000384461 107 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 PSMA6P1-201ENST00000400275 741 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 VN1R8P-201ENST00000407739 893 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AC113618.1-201ENST00000416747 285 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 TMBIM7P-201ENST00000418074 855 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 RAD23BP1-201ENST00000421404 1227 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 BEND7P1-201ENST00000422058 457 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 MTCYBP9-201ENST00000431021 303 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 SUMO1P3-201ENST00000439961 304 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AC010307.1-201ENST00000467206 836 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AC112204.1-201ENST00000502591 103 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AP000790.1-201ENST00000528891 737 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AP004609.2-201ENST00000532177 190 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AL121594.2-201ENST00000541658 472 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AC018558.5-201ENST00000565840 952 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AC141257.3-201ENST00000572906 215 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AC009955.2-201ENST00000597288 542 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AC010591.1-201ENST00000603941 649 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 MIR6862-1-201ENST00000613016 70 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 MIR6862-2-201ENST00000614755 70 ntBASIC9.43□□□□□ -0.9
PHF8Q9UPP1 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PHF8Q9UPP1 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC9.42□□□□□ -0.9
PHF8Q9UPP1 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC9.42□□□□□ -0.9
PHF8Q9UPP1 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PHF8Q9UPP1 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
PHF8Q9UPP1 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC9.42□□□□□ -0.9
PHF8Q9UPP1 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PHF8Q9UPP1 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PHF8Q9UPP1 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PHF8Q9UPP1 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PHF8Q9UPP1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC9.42□□□□□ -0.9
PHF8Q9UPP1 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC9.42□□□□□ -0.9
PHF8Q9UPP1 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC9.42□□□□□ -0.9
PHF8Q9UPP1 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PHF8Q9UPP1 RNU6-1066P-201ENST00000363573 105 ntBASIC9.42□□□□□ -0.9
PHF8Q9UPP1 MIR568-201ENST00000385036 95 ntBASIC9.42□□□□□ -0.9
PHF8Q9UPP1 RNA5SP474-201ENST00000391234 90 ntBASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms