Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 AC007998.4-201ENST00000612496 2533 ntBASIC6.03□□□□□ -1.44
SCN11AQ9UI33 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 AC008033.1-201ENST00000216407 1162 ntBASIC6.03□□□□□ -1.44
SCN11AQ9UI33 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 TDGF1P1-201ENST00000445734 527 ntBASIC6.03□□□□□ -1.44
SCN11AQ9UI33 CYCSP29-201ENST00000533731 318 ntBASIC6.03□□□□□ -1.44
SCN11AQ9UI33 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 DNM1P47-203ENST00000571780 12667 ntBASIC6.02□□□□□ -1.44
SCN11AQ9UI33 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 ARHGAP42P3-201ENST00000443989 2508 ntBASIC6.02□□□□□ -1.45
SCN11AQ9UI33 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 AL356387.2-201ENST00000422272 243 ntBASIC6.02□□□□□ -1.45
SCN11AQ9UI33 IGLVIV-65-201ENST00000517313 360 ntBASIC6.02□□□□□ -1.45
SCN11AQ9UI33 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 MIR3939-201ENST00000582614 106 ntBASIC6.02□□□□□ -1.45
SCN11AQ9UI33 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
SCN11AQ9UI33 AC239868.2-201ENST00000564237 4527 ntBASIC6.02□□□□□ -1.45
SCN11AQ9UI33 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.01□□□□□ -1.45
SCN11AQ9UI33 AC022417.1-201ENST00000624768 1303 ntBASIC6.01□□□□□ -1.45
SCN11AQ9UI33 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SCN11AQ9UI33 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.01□□□□□ -1.45
SCN11AQ9UI33 AC021146.4-201ENST00000309229 279 ntBASIC6.01□□□□□ -1.45
SCN11AQ9UI33 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SCN11AQ9UI33 MIR23B-201ENST00000384832 97 ntBASIC6.01□□□□□ -1.45
SCN11AQ9UI33 AP001324.1-201ENST00000428553 399 ntBASIC6.01□□□□□ -1.45
SCN11AQ9UI33 AL136231.1-201ENST00000429407 730 ntBASIC6.01□□□□□ -1.45
SCN11AQ9UI33 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.01□□□□□ -1.45
SCN11AQ9UI33 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.01□□□□□ -1.45
SCN11AQ9UI33 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.01□□□□□ -1.45
SCN11AQ9UI33 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.01□□□□□ -1.45
SCN11AQ9UI33 AC021483.2-201ENST00000567415 758 ntBASIC6.01□□□□□ -1.45
SCN11AQ9UI33 AC090017.1-201ENST00000548612 1779 ntBASIC6.01□□□□□ -1.45
SCN11AQ9UI33 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SCN11AQ9UI33 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SCN11AQ9UI33 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SCN11AQ9UI33 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SCN11AQ9UI33 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SCN11AQ9UI33 AC104333.2-201ENST00000422630 192 ntBASIC6.01□□□□□ -1.45
SCN11AQ9UI33 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.01□□□□□ -1.45
SCN11AQ9UI33 AC090142.1-201ENST00000465776 462 ntBASIC6.01□□□□□ -1.45
SCN11AQ9UI33 RPL21P129-201ENST00000491732 478 ntBASIC6.01□□□□□ -1.45
SCN11AQ9UI33 AC090948.1-201ENST00000607464 549 ntBASIC6.01□□□□□ -1.45
SCN11AQ9UI33 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.01□□□□□ -1.45
SCN11AQ9UI33 AP003497.2-201ENST00000624220 967 ntBASIC6.01□□□□□ -1.45
SCN11AQ9UI33 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SCN11AQ9UI33 AC020656.2-201ENST00000613291 5309 ntBASIC6□□□□□ -1.45
SCN11AQ9UI33 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC6□□□□□ -1.45
SCN11AQ9UI33 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SCN11AQ9UI33 ICE2P1-201ENST00000512800 1849 ntBASIC6□□□□□ -1.45
SCN11AQ9UI33 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6□□□□□ -1.45
SCN11AQ9UI33 AP000756.2-201ENST00000624168 2567 ntBASIC6□□□□□ -1.45
SCN11AQ9UI33 SAMMSON-210ENST00000641260 1308 ntBASIC6□□□□□ -1.45
SCN11AQ9UI33 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC6□□□□□ -1.45
SCN11AQ9UI33 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SCN11AQ9UI33 AC008549.2-201ENST00000333482 706 ntBASIC6□□□□□ -1.45
SCN11AQ9UI33 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6□□□□□ -1.45
SCN11AQ9UI33 RPL23AP59-201ENST00000399415 461 ntBASIC6□□□□□ -1.45
SCN11AQ9UI33 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC6□□□□□ -1.45
SCN11AQ9UI33 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SCN11AQ9UI33 APOA2-207ENST00000470459 416 ntTSL 5 BASIC6□□□□□ -1.45
SCN11AQ9UI33 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6□□□□□ -1.45
SCN11AQ9UI33 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6□□□□□ -1.45
SCN11AQ9UI33 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC6□□□□□ -1.45
SCN11AQ9UI33 AP001160.4-201ENST00000596971 382 ntBASIC6□□□□□ -1.45
SCN11AQ9UI33 AC009120.7-201ENST00000623452 780 ntBASIC6□□□□□ -1.45
SCN11AQ9UI33 MIR6830-201ENST00000636015 70 ntBASIC6□□□□□ -1.45
SCN11AQ9UI33 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6□□□□□ -1.45
SCN11AQ9UI33 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SCN11AQ9UI33 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
SCN11AQ9UI33 AC104118.1-201ENST00000607625 1589 ntBASIC6□□□□□ -1.45
SCN11AQ9UI33 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms