Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 RNA5SP518-201ENST00000515957 119 ntBASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 AP000435.1-201ENST00000528539 496 ntBASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 OR5M2P-201ENST00000529003 936 ntBASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 RPS27AP19-201ENST00000597285 458 ntBASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 AC078899.5-201ENST00000612475 178 ntBASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 AL603758.1-201ENST00000618654 241 ntBASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 AC211486.4-201ENST00000621495 113 ntBASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 TPTEP1-208ENST00000636884 213 ntBASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 AC116158.1-201ENST00000560231 2129 ntBASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 ERCC6-202ENST00000374127 1782 ntBASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.64□□□□□ -1.19
LIMD1Q9UGP4 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 AL022163.1-201ENST00000430261 1569 ntBASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 IARS-201ENST00000375627 697 ntTSL 3 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 RNU6-510P-201ENST00000391239 108 ntBASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 EEF1GP7-201ENST00000422983 703 ntBASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 FTH1P20-201ENST00000434913 548 ntBASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 MORF4-201ENST00000447135 971 ntBASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 AC034159.1-201ENST00000513885 583 ntBASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 AP001803.1-201ENST00000525668 147 ntBASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 AC079075.1-201ENST00000559543 878 ntBASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 AC122134.1-201ENST00000565664 1104 ntBASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 ANP32BP1-202ENST00000568553 737 ntBASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 AC006504.6-201ENST00000590142 199 ntBASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 AC092032.1-201ENST00000603090 165 ntBASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 AC015712.7-201ENST00000615211 635 ntBASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 AC010149.2-201ENST00000637608 315 ntBASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 XRCC6P2-201ENST00000457831 1822 ntBASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 AL512662.1-201ENST00000624850 2251 ntBASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 AC090229.1-201ENST00000590983 1609 ntBASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 RLIMP2-201ENST00000427891 1563 ntBASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIMD1Q9UGP4 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 CASC19-205ENST00000641013 1411 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms