Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC097063.1-201ENST00000426714 1797 ntBASIC4.62□□□□□ -1.67
CCDC88CQ9P219 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 OR2AH1P-201ENST00000425717 928 ntBASIC4.62□□□□□ -1.67
CCDC88CQ9P219 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 RNU6-709P-201ENST00000517257 104 ntBASIC4.62□□□□□ -1.67
CCDC88CQ9P219 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 AC020910.3-201ENST00000603701 874 ntBASIC4.62□□□□□ -1.67
CCDC88CQ9P219 AC243960.7-201ENST00000623532 707 ntBASIC4.62□□□□□ -1.67
CCDC88CQ9P219 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 RNA5SP191-201ENST00000362585 102 ntBASIC4.61□□□□□ -1.67
CCDC88CQ9P219 BTF3P6-201ENST00000448054 499 ntBASIC4.61□□□□□ -1.67
CCDC88CQ9P219 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 AC020779.1-201ENST00000478757 796 ntBASIC4.61□□□□□ -1.67
CCDC88CQ9P219 RPL5P22-201ENST00000480199 884 ntBASIC4.61□□□□□ -1.67
CCDC88CQ9P219 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 AC020937.1-201ENST00000519677 1013 ntBASIC4.61□□□□□ -1.67
CCDC88CQ9P219 HIGD1AP5-201ENST00000529959 259 ntBASIC4.61□□□□□ -1.67
CCDC88CQ9P219 LSM3P2-201ENST00000551246 273 ntBASIC4.61□□□□□ -1.67
CCDC88CQ9P219 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 AP001642.1-201ENST00000624727 2117 ntBASIC4.61□□□□□ -1.67
CCDC88CQ9P219 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC88CQ9P219 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 MORF4L1P4-201ENST00000450245 976 ntBASIC4.6□□□□□ -1.67
CCDC88CQ9P219 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 GYG1P1-201ENST00000460864 698 ntBASIC4.6□□□□□ -1.67
CCDC88CQ9P219 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 EIF1P5-201ENST00000585002 234 ntBASIC4.6□□□□□ -1.67
CCDC88CQ9P219 AF230666.2-201ENST00000602328 725 ntBASIC4.6□□□□□ -1.67
CCDC88CQ9P219 AC010424.2-201ENST00000607594 443 ntBASIC4.6□□□□□ -1.67
CCDC88CQ9P219 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.6□□□□□ -1.67
CCDC88CQ9P219 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 AC133552.1-201ENST00000569988 4007 ntBASIC4.6□□□□□ -1.67
CCDC88CQ9P219 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 RN7SKP106-201ENST00000410832 272 ntBASIC4.6□□□□□ -1.67
CCDC88CQ9P219 EIF4HP2-201ENST00000424380 563 ntBASIC4.6□□□□□ -1.67
CCDC88CQ9P219 AL356390.1-201ENST00000455684 397 ntBASIC4.6□□□□□ -1.67
CCDC88CQ9P219 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 AL512782.1-201ENST00000603093 364 ntBASIC4.6□□□□□ -1.67
CCDC88CQ9P219 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC88CQ9P219 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.59□□□□□ -1.67
CCDC88CQ9P219 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC88CQ9P219 AC139713.2-214ENST00000642059 1811 ntBASIC4.59□□□□□ -1.67
CCDC88CQ9P219 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CCDC88CQ9P219 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC88CQ9P219 AC010928.1-201ENST00000592477 1447 ntBASIC4.59□□□□□ -1.67
CCDC88CQ9P219 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC88CQ9P219 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCDC88CQ9P219 SNORA70.10-201ENST00000384515 134 ntBASIC4.59□□□□□ -1.67
CCDC88CQ9P219 AP000580.1-201ENST00000404439 358 ntBASIC4.59□□□□□ -1.67
CCDC88CQ9P219 AC004074.1-201ENST00000421810 1063 ntBASIC4.59□□□□□ -1.67
CCDC88CQ9P219 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC88CQ9P219 AC234781.3-201ENST00000452540 973 ntBASIC4.59□□□□□ -1.67
CCDC88CQ9P219 AC092593.2-201ENST00000513866 913 ntBASIC4.59□□□□□ -1.67
CCDC88CQ9P219 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms