Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL035079.1-201ENST00000405210 287 ntBASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AC009302.1-201ENST00000417147 390 ntBASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 MRPS21P2-201ENST00000424704 264 ntBASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AC005033.1-201ENST00000428904 813 ntBASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 ARL4AP4-201ENST00000434170 518 ntBASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AC099063.2-201ENST00000446360 662 ntBASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 OR2AF1P-201ENST00000454899 889 ntBASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 RN7SL809P-201ENST00000482040 297 ntBASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 RPL37AP8-201ENST00000494116 276 ntBASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AC008953.1-201ENST00000497334 318 ntBASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AC019322.1-201ENST00000571869 389 ntBASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 KATNBL1P5-201ENST00000605015 517 ntBASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AC073592.7-201ENST00000623659 507 ntBASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AL356094.1-201ENST00000624663 1212 ntBASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AC011755.1-201ENST00000623763 2049 ntBASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AC019072.1-201ENST00000604535 1551 ntBASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
BLOC1S4Q9NUP1 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
BLOC1S4Q9NUP1 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
BLOC1S4Q9NUP1 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 AC073136.1-201ENST00000449426 2884 ntBASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 CASC19-221ENST00000641309 1382 ntBASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 AC005332.5-201ENST00000591222 2919 ntBASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 SNORA2.3-201ENST00000383920 135 ntBASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 HMGB1P10-201ENST00000395823 563 ntBASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 RPS27AP11-201ENST00000402798 447 ntBASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 RN7SKP126-201ENST00000411143 300 ntBASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 RN7SKP273-201ENST00000411392 314 ntBASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 AL139148.1-201ENST00000427122 680 ntBASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 RPL34P26-201ENST00000445636 354 ntBASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 CLIC4P1-201ENST00000453177 535 ntBASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 AC245028.2-201ENST00000458673 253 ntBASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 RN7SL30P-201ENST00000488416 306 ntBASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 HIGD1AP14-201ENST00000507617 282 ntBASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 RN7SKP141-201ENST00000516167 338 ntBASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 AC090022.1-201ENST00000546569 311 ntBASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 AC124856.1-201ENST00000600819 896 ntBASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 AC025175.1-201ENST00000606482 759 ntBASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BLOC1S4Q9NUP1 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms