Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AL022311.1-201ENST00000623726 19416 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AL078621.3-201ENST00000623707 2042 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 CASC19-261ENST00000641853 1638 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 SAMMSON-213ENST00000641336 1521 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 RNU1-19P-201ENST00000363306 165 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 RNU6-354P-201ENST00000383862 107 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 RNU6-468P-201ENST00000384003 109 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 RNU6-610P-201ENST00000384264 107 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 OR6E1P-201ENST00000414424 923 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 TCEA1P4-201ENST00000415066 844 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 TNPO1P1-201ENST00000423641 1138 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AC013262.1-201ENST00000426710 252 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 RPL19P16-201ENST00000433839 588 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 RPL7P29-201ENST00000437151 728 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 MED6P1-201ENST00000439659 713 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 RPL7P33-201ENST00000444159 742 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AC099063.2-201ENST00000446360 662 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AL096829.2-201ENST00000446582 742 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AC092754.1-201ENST00000472975 479 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 RPS17P11-201ENST00000474297 293 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 RPS12P31-201ENST00000491419 398 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 SCARNA16.4-201ENST00000516956 187 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 OR8G3P-201ENST00000533406 921 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 POLR2KP1-201ENST00000553226 168 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 NMNAT1P5-201ENST00000559657 841 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 ZNF92P3-201ENST00000596594 954 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AC011458.1-201ENST00000604034 617 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AP002967.1-201ENST00000624203 539 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AP003400.3-201ENST00000624904 346 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AC091305.2-201ENST00000624049 1576 ntBASIC5.19□□□□□ -1.58
BRF2Q9HAW0 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF2Q9HAW0 AL031595.2-201ENST00000624215 19071 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 HMGB3P19-201ENST00000403971 560 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AL590290.1-201ENST00000405336 380 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 RNU2-50P-201ENST00000410494 143 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AL024507.1-201ENST00000412741 274 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AC013404.1-201ENST00000413068 249 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AL445183.3-201ENST00000414168 502 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AC009302.1-201ENST00000417147 390 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AC023128.2-201ENST00000420880 1223 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AC073310.1-201ENST00000423226 1033 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms