Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SNORA70.10-201ENST00000384515 134 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 MIR105-2-201ENST00000385083 81 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 LRRC37BP1-201ENST00000398851 714 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 SNORA77-201ENST00000408716 125 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 AC093162.1-201ENST00000419682 124 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 AL450023.3-201ENST00000440592 271 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 CEACAMP7-201ENST00000444105 496 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 HMGB1P4-201ENST00000455362 567 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 AC020890.1-201ENST00000491837 504 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 OR5M14P-201ENST00000506803 618 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 COX6B1P5-201ENST00000509843 249 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 AC013701.1-201ENST00000522657 465 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 AC012339.2-201ENST00000523996 453 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 EIF4A2P5-201ENST00000529914 499 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 OR7E128P-201ENST00000532736 1024 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 AC005868.1-201ENST00000536421 331 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL21A1Q96P44 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL21A1Q96P44 NMNAT1P1-201ENST00000554095 876 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 BNIP3P32-201ENST00000600015 554 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 AC105254.2-201ENST00000603636 436 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 EIF3FP1-201ENST00000613970 806 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 AP002799.1-201ENST00000623552 423 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL21A1Q96P44 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL21A1Q96P44 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL21A1Q96P44 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL21A1Q96P44 AL513548.1-201ENST00000562904 1724 ntBASIC4.66□□□□□ -1.66
COL21A1Q96P44 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
COL21A1Q96P44 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.65□□□□□ -1.66
COL21A1Q96P44 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COL21A1Q96P44 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL21A1Q96P44 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
COL21A1Q96P44 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL21A1Q96P44 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL21A1Q96P44 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.65□□□□□ -1.66
COL21A1Q96P44 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL21A1Q96P44 CUL4AP1-201ENST00000514750 1863 ntBASIC4.65□□□□□ -1.66
COL21A1Q96P44 AC245100.2-201ENST00000454544 1679 ntBASIC4.65□□□□□ -1.66
COL21A1Q96P44 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL21A1Q96P44 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
COL21A1Q96P44 SNORA73.1-201ENST00000363107 205 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 RNA5SP455-201ENST00000365190 119 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
COL21A1Q96P44 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
COL21A1Q96P44 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.65□□□□□ -1.67
COL21A1Q96P44 Z97832.1-201ENST00000402490 328 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.65□□□□□ -1.67
COL21A1Q96P44 RN7SKP199-201ENST00000410325 305 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.65□□□□□ -1.67
COL21A1Q96P44 QRSL1P2-201ENST00000418582 964 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.65□□□□□ -1.67
COL21A1Q96P44 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.65□□□□□ -1.67
COL21A1Q96P44 RPS29P9-201ENST00000440360 171 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 AC073052.1-201ENST00000440417 714 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 AC092647.3-201ENST00000443044 633 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 OR7E125P-201ENST00000443450 846 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 SBDSP1-204ENST00000453858 737 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.65□□□□□ -1.67
COL21A1Q96P44 AC091544.1-201ENST00000484702 348 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.65□□□□□ -1.67
COL21A1Q96P44 RN7SKP147-201ENST00000517154 244 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.65□□□□□ -1.67
COL21A1Q96P44 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.65□□□□□ -1.67
COL21A1Q96P44 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.65□□□□□ -1.67
COL21A1Q96P44 AL049830.4-201ENST00000555149 351 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.65□□□□□ -1.67
COL21A1Q96P44 AC087763.1-201ENST00000603391 286 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 AC093799.2-201ENST00000610062 578 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 AC244517.3-201ENST00000616254 1235 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 AC022960.2-201ENST00000616300 666 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 AC018445.2-201ENST00000622987 260 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.65□□□□□ -1.67
COL21A1Q96P44 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.65□□□□□ -1.67
COL21A1Q96P44 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL21A1Q96P44 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL21A1Q96P44 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.65□□□□□ -1.67
COL21A1Q96P44 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
COL21A1Q96P44 CR383656.5-201ENST00000547616 1340 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL21A1Q96P44 CASC19-281ENST00000642118 1554 ntBASIC4.65□□□□□ -1.67
COL21A1Q96P44 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
COL21A1Q96P44 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL21A1Q96P44 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.64□□□□□ -1.67
COL21A1Q96P44 AL133268.1-201ENST00000405676 1401 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms