Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AP000676.2-201ENST00000529711 301 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 AC084121.1-201ENST00000533882 835 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 NMNAT1P1-201ENST00000554095 876 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 AC016727.2-201ENST00000603988 621 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 AC009161.2-201ENST00000624626 138 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 MIR4302-201ENST00000638058 60 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LRCH3Q96II8 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LRCH3Q96II8 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LRCH3Q96II8 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
LRCH3Q96II8 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 RPL12P38-202ENST00000588627 2319 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LRCH3Q96II8 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LRCH3Q96II8 ZNF734P-201ENST00000419494 1534 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LRCH3Q96II8 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 DDX18P6-201ENST00000450119 1997 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 PHF2P2-202ENST00000444553 2865 ntBASIC7.96□□□□□ -1.13
LRCH3Q96II8 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
LRCH3Q96II8 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
LRCH3Q96II8 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
LRCH3Q96II8 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
LRCH3Q96II8 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC7.96□□□□□ -1.13
LRCH3Q96II8 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
LRCH3Q96II8 LINC02035-201ENST00000610128 5476 ntBASIC7.96□□□□□ -1.13
LRCH3Q96II8 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
LRCH3Q96II8 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC7.96□□□□□ -1.13
LRCH3Q96II8 NF1P8-201ENST00000415351 1461 ntBASIC7.96□□□□□ -1.13
LRCH3Q96II8 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LRCH3Q96II8 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LRCH3Q96II8 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LRCH3Q96II8 RNU1-55P-201ENST00000365510 158 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LRCH3Q96II8 RNA5SP53-201ENST00000391299 120 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LRCH3Q96II8 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 OR51A3P-201ENST00000413596 924 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 AC234782.4-201ENST00000417646 1048 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 AC096644.2-201ENST00000429278 159 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 RN7SL706P-201ENST00000460079 292 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 AC007547.1-201ENST00000462177 490 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 RPS4XP10-201ENST00000465034 731 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 AC233702.1-201ENST00000482905 502 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 AC018797.1-201ENST00000510791 255 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 TTC39CP1-201ENST00000512513 755 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 Y_RNA.668-201ENST00000516233 93 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 CASP1-216ENST00000534497 825 ntTSL 5 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 AP001180.3-201ENST00000582221 145 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 TPMTP1-201ENST00000592307 737 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 AL133338.2-201ENST00000604292 736 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 uc_338.15-201ENST00000615470 191 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 AC089999.3-201ENST00000622440 577 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 OR7E161P-202ENST00000641994 1033 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LRCH3Q96II8 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LRCH3Q96II8 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LRCH3Q96II8 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LRCH3Q96II8 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LRCH3Q96II8 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LRCH3Q96II8 AC145138.1-201ENST00000512908 2851 ntBASIC7.96□□□□□ -1.14
LRCH3Q96II8 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC7.96□□□□□ -1.14
LRCH3Q96II8 CTAGE3P-201ENST00000454280 2404 ntBASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms