Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 AL450326.2-201ENST00000421913 1962 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFT1Q96AA3 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 OR52B1P-201ENST00000316506 909 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 RN7SKP153-201ENST00000365026 316 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 RN7SKP16-201ENST00000410180 299 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 AC012497.1-201ENST00000429392 575 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 FMO7P-201ENST00000436045 768 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 RPL35AP21-201ENST00000437667 333 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 AL513321.1-201ENST00000441175 761 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 HMGB1P5-202ENST00000451497 985 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 MTND2P30-201ENST00000456663 382 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 RN7SL168P-201ENST00000463821 279 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 AC092754.1-201ENST00000472975 479 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 MTND6P2-201ENST00000512226 524 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 RN7SKP46-201ENST00000515942 234 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 snoU109.6-201ENST00000516831 118 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 HIGD1AP18-201ENST00000520730 278 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 AC079600.1-201ENST00000550326 297 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 IGBP1P1-201ENST00000554337 1009 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RFT1Q96AA3 AC233266.2-201ENST00000567067 528 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 RBM22P12-201ENST00000567098 1255 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 CBX3P2-202ENST00000583365 535 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 AL671309.1-201ENST00000603750 544 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 AC233280.2-201ENST00000603917 1070 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 AC012557.1-201ENST00000607115 611 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 AL023583.1-201ENST00000607518 1143 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 AC109583.2-201ENST00000617367 129 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.64□□□□□ -1.67
RFT1Q96AA3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RFT1Q96AA3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFT1Q96AA3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFT1Q96AA3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFT1Q96AA3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFT1Q96AA3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFT1Q96AA3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
RFT1Q96AA3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
RFT1Q96AA3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.63□□□□□ -1.67
RFT1Q96AA3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.63□□□□□ -1.67
RFT1Q96AA3 OR51H2P-202ENST00000641424 3046 ntBASIC4.63□□□□□ -1.67
RFT1Q96AA3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
RFT1Q96AA3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RFT1Q96AA3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.63□□□□□ -1.67
RFT1Q96AA3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RFT1Q96AA3 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RFT1Q96AA3 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
RFT1Q96AA3 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RFT1Q96AA3 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RFT1Q96AA3 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
RFT1Q96AA3 RNU6-225P-201ENST00000384613 103 ntBASIC4.63□□□□□ -1.67
RFT1Q96AA3 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RFT1Q96AA3 AC005522.1-201ENST00000395416 346 ntBASIC4.63□□□□□ -1.67
RFT1Q96AA3 VN1R12P-201ENST00000403778 876 ntBASIC4.63□□□□□ -1.67
RFT1Q96AA3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.63□□□□□ -1.67
RFT1Q96AA3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.63□□□□□ -1.67
RFT1Q96AA3 AL358176.3-201ENST00000420757 454 ntBASIC4.63□□□□□ -1.67
RFT1Q96AA3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.63□□□□□ -1.67
RFT1Q96AA3 AL390879.2-203ENST00000426943 1121 ntBASIC4.63□□□□□ -1.67
RFT1Q96AA3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.63□□□□□ -1.67
RFT1Q96AA3 AC073508.1-201ENST00000428866 656 ntBASIC4.63□□□□□ -1.67
RFT1Q96AA3 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.63□□□□□ -1.67
RFT1Q96AA3 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.63□□□□□ -1.67
RFT1Q96AA3 AC006326.1-201ENST00000445465 787 ntBASIC4.63□□□□□ -1.67
RFT1Q96AA3 AL450996.1-201ENST00000445574 1202 ntBASIC4.63□□□□□ -1.67
RFT1Q96AA3 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RFT1Q96AA3 BTF3P6-201ENST00000448054 499 ntBASIC4.63□□□□□ -1.67
RFT1Q96AA3 LRRC37A14P-201ENST00000452297 462 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms