Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 AC006213.6-201ENST00000623722 4179 ntBASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 AC100871.1-201ENST00000507871 1456 ntBASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 RPL5P19-201ENST00000404228 893 ntBASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 AC211486.3-201ENST00000412694 621 ntBASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 Z77249.1-201ENST00000444622 1175 ntBASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 REG1CP-206ENST00000447469 496 ntBASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 RN7SL604P-201ENST00000492589 296 ntBASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 AC005351.1-201ENST00000511152 786 ntBASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 HMGB1P40-201ENST00000525121 540 ntBASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 AP003717.3-201ENST00000544832 1180 ntBASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 AC087888.1-201ENST00000550884 1254 ntBASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 AC011487.3-201ENST00000593607 453 ntBASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 AC025175.1-201ENST00000606482 759 ntBASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 EIF3FP1-201ENST00000613970 806 ntBASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 AC004232.3-201ENST00000622977 525 ntBASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SMC1BQ8NDV3 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AC018628.1-201ENST00000624147 3819 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AC096921.2-201ENST00000561507 1916 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 MIR133B-201ENST00000362210 119 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 RN7SKP6-201ENST00000364795 319 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 RNU6-1005P-201ENST00000384519 107 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 MIR551A-201ENST00000385042 96 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 RNA5SP105-201ENST00000391123 113 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 COX6B1P1-201ENST00000415962 213 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AC068287.1-201ENST00000430283 295 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AL590399.4-201ENST00000436561 601 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 MTCYBP31-201ENST00000438855 1122 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AC023512.1-201ENST00000444513 499 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AC012512.1-201ENST00000446594 718 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AC008280.2-201ENST00000455473 307 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 RPL7P16-201ENST00000479738 738 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 RN7SKP253-201ENST00000516424 309 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 HSPE1P2-201ENST00000554777 306 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 MIR4270-201ENST00000581799 70 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AC068020.1-201ENST00000594215 661 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AC130352.1-201ENST00000602979 661 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 Z99289.3-201ENST00000605586 594 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AC106052.1-201ENST00000608029 497 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AC090527.3-201ENST00000619041 548 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 AC022079.2-201ENST00000619739 566 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms