Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 DNAJC8P1-201ENST00000554535 372 ntBASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 AC110588.1-201ENST00000559699 137 ntBASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 MIR3135A-201ENST00000578460 77 ntBASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 MIR3682-201ENST00000581338 84 ntBASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 AC100830.2-201ENST00000581636 240 ntBASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 AC008638.3-201ENST00000603341 463 ntBASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 AC122710.3-201ENST00000606566 541 ntBASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 AL137000.1-201ENST00000610528 1244 ntBASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 AP003789.1-201ENST00000617737 605 ntBASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 AC068722.2-201ENST00000618734 544 ntBASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 AL121985.3-201ENST00000620690 523 ntBASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 AC007347.2-201ENST00000623044 180 ntBASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 AL683826.1-201ENST00000624104 627 ntBASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 AC119674.1-207ENST00000641355 633 ntBASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 OR2A3P-202ENST00000641249 1776 ntBASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 UG0898H09-202ENST00000623646 7040 ntBASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.13□□□□□ -1.27
LYSMD3Q7Z3D4 CDY7P-201ENST00000429883 1604 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AC009831.5-201ENST00000624000 3189 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AL121949.2-201ENST00000403446 1548 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AP000866.6-201ENST00000638898 3579 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AC107982.1-201ENST00000507171 1300 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 U8.3-201ENST00000363321 132 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 RNU6-1339P-201ENST00000363574 91 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 RNU4-31P-201ENST00000384211 141 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 MIR152-201ENST00000385212 87 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 DSTNP5-201ENST00000427921 523 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 EIF4A1P5-201ENST00000428062 1095 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 DYNLL1P7-201ENST00000429273 258 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AL121916.1-201ENST00000429405 308 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 BMS1P19-201ENST00000433925 393 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AL353093.1-201ENST00000441292 436 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 CBWD4P-201ENST00000445695 655 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 PRDX1P1-201ENST00000449329 596 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 RNA5SP518-201ENST00000515957 119 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 ZNF705CP-201ENST00000530515 889 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 FAM30C-201ENST00000561158 410 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AC112187.2-201ENST00000604345 283 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AC011816.2-201ENST00000607089 556 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AC009268.2-201ENST00000621925 457 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AC093909.6-201ENST00000624757 775 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 U6.107-201ENST00000637108 79 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AC132219.2-201ENST00000624416 2327 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 RLIMP2-201ENST00000427891 1563 ntBASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.12□□□□□ -1.27
LYSMD3Q7Z3D4 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LYSMD3Q7Z3D4 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
LYSMD3Q7Z3D4 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.11□□□□□ -1.27
LYSMD3Q7Z3D4 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
LYSMD3Q7Z3D4 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.11□□□□□ -1.27
LYSMD3Q7Z3D4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LYSMD3Q7Z3D4 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
LYSMD3Q7Z3D4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LYSMD3Q7Z3D4 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.11□□□□□ -1.27
LYSMD3Q7Z3D4 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms