Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHFQ7M4L6 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHFQ7M4L6 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 AL157392.4-201ENST00000609756 345 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 AC140725.3-201ENST00000616193 880 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 AC087565.3-203ENST00000641018 837 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHFQ7M4L6 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 Z95331.1-201ENST00000623075 23112 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHFQ7M4L6 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHFQ7M4L6 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHFQ7M4L6 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHFQ7M4L6 CDC27P2-201ENST00000425026 1922 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHFQ7M4L6 AC083843.2-201ENST00000568248 6253 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHFQ7M4L6 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHFQ7M4L6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHFQ7M4L6 RNU6-244P-201ENST00000391028 104 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 ANAPC10P1-201ENST00000395991 556 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 UBE2V1P11-201ENST00000411559 285 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 OR51A6P-201ENST00000418680 1004 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 EIF4A1P1-201ENST00000420241 934 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 AC093422.3-201ENST00000428506 305 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 MTCO1P53-201ENST00000441633 699 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 AC016772.1-201ENST00000444170 1261 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 RBMY2TP-201ENST00000451162 947 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 RPL7P61-201ENST00000451721 751 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 PRPF38AP1-201ENST00000451976 933 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 AC008280.2-201ENST00000455473 307 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHFQ7M4L6 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 RPL9P15-201ENST00000491096 532 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 AC098862.1-201ENST00000504991 413 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHFQ7M4L6 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHFQ7M4L6 RN7SKP265-201ENST00000516448 223 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHFQ7M4L6 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 AC092121.1-201ENST00000569452 202 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 MIR5010-201ENST00000582846 120 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 AL160237.3-201ENST00000604114 1013 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 AC097655.1-201ENST00000635075 318 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 AC099654.6-201ENST00000636487 512 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 AC132825.7-201ENST00000638744 335 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 AL132640.2-201ENST00000559968 1698 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 AC004817.4-201ENST00000602396 3625 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHFQ7M4L6 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHFQ7M4L6 AC017007.4-201ENST00000503353 1352 ntBASIC4.88□□□□□ -1.63
SHFQ7M4L6 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHFQ7M4L6 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SHFQ7M4L6 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHFQ7M4L6 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHFQ7M4L6 OR9K1P-201ENST00000326513 941 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHFQ7M4L6 MIR375-201ENST00000362103 64 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHFQ7M4L6 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 GAPDHP42-201ENST00000406848 981 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 LINC01347-201ENST00000417964 355 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC234781.4-201ENST00000419384 244 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 OR6C64P-201ENST00000419708 825 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC113412.1-201ENST00000425840 504 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 RPL23AP4-201ENST00000427757 463 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms