Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CTR9Q6PD62 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
CTR9Q6PD62 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
CTR9Q6PD62 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CTR9Q6PD62 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.94□□□□□ -1.46
CTR9Q6PD62 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.94□□□□□ -1.46
CTR9Q6PD62 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CTR9Q6PD62 TET1P1-201ENST00000426627 2301 ntBASIC5.93□□□□□ -1.46
CTR9Q6PD62 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CTR9Q6PD62 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CTR9Q6PD62 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CTR9Q6PD62 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
CTR9Q6PD62 RN7SKP149-201ENST00000363008 344 ntBASIC5.93□□□□□ -1.46
CTR9Q6PD62 TRAV35-201ENST00000390462 330 ntBASIC5.93□□□□□ -1.46
CTR9Q6PD62 AC233289.1-201ENST00000403700 508 ntBASIC5.93□□□□□ -1.46
CTR9Q6PD62 RN7SKP16-201ENST00000410180 299 ntBASIC5.93□□□□□ -1.46
CTR9Q6PD62 SNORA79B-201ENST00000410557 148 ntBASIC5.93□□□□□ -1.46
CTR9Q6PD62 COX5BP7-201ENST00000414780 274 ntBASIC5.93□□□□□ -1.46
CTR9Q6PD62 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.93□□□□□ -1.46
CTR9Q6PD62 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.93□□□□□ -1.46
CTR9Q6PD62 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.93□□□□□ -1.46
CTR9Q6PD62 PRPF38AP2-201ENST00000438179 851 ntBASIC5.93□□□□□ -1.46
CTR9Q6PD62 AL450263.2-201ENST00000439400 589 ntBASIC5.93□□□□□ -1.46
CTR9Q6PD62 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CTR9Q6PD62 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.93□□□□□ -1.46
CTR9Q6PD62 RNA5SP392-201ENST00000516905 112 ntBASIC5.93□□□□□ -1.46
CTR9Q6PD62 PCNPP1-201ENST00000552501 511 ntBASIC5.93□□□□□ -1.46
CTR9Q6PD62 AC040958.1-201ENST00000561102 201 ntBASIC5.93□□□□□ -1.46
CTR9Q6PD62 AC009117.1-201ENST00000563948 554 ntBASIC5.93□□□□□ -1.46
CTR9Q6PD62 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.93□□□□□ -1.46
CTR9Q6PD62 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.93□□□□□ -1.46
CTR9Q6PD62 AC005084.1-201ENST00000605160 304 ntBASIC5.93□□□□□ -1.46
CTR9Q6PD62 AC116651.1-201ENST00000609724 556 ntBASIC5.93□□□□□ -1.46
CTR9Q6PD62 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.93□□□□□ -1.46
CTR9Q6PD62 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CTR9Q6PD62 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CTR9Q6PD62 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
CTR9Q6PD62 MAPK10-286ENST00000641208 8747 ntBASIC5.93□□□□□ -1.46
CTR9Q6PD62 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CTR9Q6PD62 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.93□□□□□ -1.46
CTR9Q6PD62 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CTR9Q6PD62 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.93□□□□□ -1.46
CTR9Q6PD62 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CTR9Q6PD62 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
CTR9Q6PD62 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.92□□□□□ -1.46
CTR9Q6PD62 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.92□□□□□ -1.46
CTR9Q6PD62 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CTR9Q6PD62 AC007618.1-201ENST00000366455 732 ntBASIC5.92□□□□□ -1.46
CTR9Q6PD62 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.92□□□□□ -1.46
CTR9Q6PD62 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CTR9Q6PD62 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CTR9Q6PD62 LRRC37BP1-201ENST00000398851 714 ntBASIC5.92□□□□□ -1.46
CTR9Q6PD62 AL136116.2-201ENST00000404020 785 ntBASIC5.92□□□□□ -1.46
CTR9Q6PD62 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.92□□□□□ -1.46
CTR9Q6PD62 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.92□□□□□ -1.46
CTR9Q6PD62 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.92□□□□□ -1.46
CTR9Q6PD62 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.92□□□□□ -1.46
CTR9Q6PD62 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.92□□□□□ -1.46
CTR9Q6PD62 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.92□□□□□ -1.46
CTR9Q6PD62 BTG4P1-201ENST00000510421 183 ntBASIC5.92□□□□□ -1.46
CTR9Q6PD62 AC100784.1-201ENST00000522790 310 ntBASIC5.92□□□□□ -1.46
CTR9Q6PD62 MORF4L1P3-201ENST00000525966 950 ntBASIC5.92□□□□□ -1.46
CTR9Q6PD62 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.92□□□□□ -1.46
CTR9Q6PD62 EIF4A2P5-201ENST00000529914 499 ntBASIC5.92□□□□□ -1.46
CTR9Q6PD62 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.92□□□□□ -1.46
CTR9Q6PD62 AC011453.2-201ENST00000603737 729 ntBASIC5.92□□□□□ -1.46
CTR9Q6PD62 AC079791.1-201ENST00000605356 973 ntBASIC5.92□□□□□ -1.46
CTR9Q6PD62 AP001521.2-201ENST00000608772 546 ntBASIC5.92□□□□□ -1.46
CTR9Q6PD62 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.92□□□□□ -1.46
CTR9Q6PD62 AC006840.1-201ENST00000623069 542 ntBASIC5.92□□□□□ -1.46
CTR9Q6PD62 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.92□□□□□ -1.46
CTR9Q6PD62 AL596275.2-204ENST00000641628 552 ntBASIC5.92□□□□□ -1.46
CTR9Q6PD62 AL596275.2-206ENST00000641957 626 ntBASIC5.92□□□□□ -1.46
CTR9Q6PD62 AL022322.2-201ENST00000624072 20397 ntBASIC5.92□□□□□ -1.46
CTR9Q6PD62 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
CTR9Q6PD62 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CTR9Q6PD62 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
CTR9Q6PD62 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.92□□□□□ -1.46
CTR9Q6PD62 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CTR9Q6PD62 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.92□□□□□ -1.46
CTR9Q6PD62 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
CTR9Q6PD62 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTR9Q6PD62 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTR9Q6PD62 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.91□□□□□ -1.46
CTR9Q6PD62 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTR9Q6PD62 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.91□□□□□ -1.46
CTR9Q6PD62 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.91□□□□□ -1.46
CTR9Q6PD62 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CTR9Q6PD62 MIR585-201ENST00000384887 94 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 HMGB3P7-201ENST00000400214 611 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.91□□□□□ -1.46
CTR9Q6PD62 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.91□□□□□ -1.46
CTR9Q6PD62 RPL12P43-201ENST00000420608 499 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 AL360081.1-201ENST00000428299 555 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.91□□□□□ -1.46
CTR9Q6PD62 AL049745.1-201ENST00000433953 286 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 AC093414.1-201ENST00000434712 514 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 TMX2P1-201ENST00000436507 708 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 ARAFP2-201ENST00000440565 559 ntBASIC5.91□□□□□ -1.46
CTR9Q6PD62 GTF3AP5-201ENST00000442645 697 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms