Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AL022311.1-201ENST00000623726 19416 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 MTND4P8-201ENST00000514997 1362 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 PWAR1-201ENST00000624188 2414 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 RNU6-1242P-201ENST00000391052 103 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 MTCO2P31-201ENST00000402702 684 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 RN7SKP146-201ENST00000410242 334 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 SLC20A1P1-201ENST00000413906 956 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 RPL35AP31-201ENST00000418340 337 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 MTND2P16-201ENST00000419987 799 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 RPL12P12-201ENST00000424633 501 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC130360.1-201ENST00000425489 1117 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AL009174.1-201ENST00000426577 416 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 NANOGP4-201ENST00000427230 913 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 DYNLL1P7-201ENST00000429273 258 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC108479.1-201ENST00000431142 427 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 PSMD10P2-201ENST00000432890 672 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 RPL12P49-201ENST00000441100 121 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 CUBNP2-201ENST00000443534 1139 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC016027.4-201ENST00000450866 277 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 RPL12P30-201ENST00000488389 499 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 COX6B1P2-201ENST00000489624 230 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC118282.2-201ENST00000508739 374 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 RNU6-347P-201ENST00000516658 105 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC023632.1-201ENST00000518463 375 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC130365.2-201ENST00000525882 1201 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 MTND3P12-201ENST00000559068 328 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC023813.2-201ENST00000564321 469 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 MIR4701-201ENST00000583094 63 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC015688.2-201ENST00000584523 262 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC006115.2-201ENST00000596823 202 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 NTAN1P1-201ENST00000603150 646 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AL592148.2-201ENST00000612210 372 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC243654.2-201ENST00000612843 443 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC096861.1-201ENST00000616652 240 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 SNX18P12-201ENST00000624821 759 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC087821.2-201ENST00000637086 450 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 PSG10P-201ENST00000501199 1500 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 ABCC13-202ENST00000463099 3842 ntBASIC5.56□□□□□ -1.52
RNF220Q5VTB9 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF220Q5VTB9 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 BX005019.1-201ENST00000561881 1810 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 OR10R3P-201ENST00000361688 942 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 SNORA21-201ENST00000362423 132 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 OR1L1-202ENST00000373686 1083 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 CTSL3P-202ENST00000412179 788 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AC211486.3-201ENST00000412694 621 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AL096829.1-201ENST00000413677 457 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 KCTD9P1-201ENST00000430462 1167 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms