Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 AC109446.4-201ENST00000623235 2755 ntBASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 RN7SKP186-201ENST00000365371 303 ntBASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 AL079342.2-201ENST00000403367 482 ntBASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 RN7SKP278-201ENST00000410504 342 ntBASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 Z93019.1-201ENST00000416450 973 ntBASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 AC073410.1-201ENST00000435125 589 ntBASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 RHEBP2-201ENST00000450289 600 ntBASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 AL161747.1-201ENST00000480068 358 ntBASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 AC083795.1-201ENST00000491760 320 ntBASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 AL035404.1-201ENST00000497982 568 ntBASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 MTATP6P15-201ENST00000527233 835 ntBASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 MRPS36P5-201ENST00000551909 298 ntBASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 FAM27E4-201ENST00000605259 342 ntBASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 AC068057.2-201ENST00000624047 895 ntBASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 AC016717.3-201ENST00000624730 554 ntBASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 MTND4P10-201ENST00000446199 1363 ntBASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 AC006042.3-201ENST00000454684 1469 ntBASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 SELENOWP1-201ENST00000322792 252 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 SNORD1C-201ENST00000363315 78 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 RNA5SP500-201ENST00000364486 119 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 MIR1178-201ENST00000408396 91 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AC107081.1-201ENST00000414975 361 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AC027644.1-201ENST00000419595 298 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 RPL34P3-201ENST00000421454 338 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 CNOT7P1-201ENST00000429006 852 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AC126120.1-201ENST00000431082 470 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 NANOGP2-201ENST00000435391 727 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 RPS7P5-201ENST00000441482 581 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 OSTCP1-201ENST00000455507 450 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AC012123.2-201ENST00000485809 248 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 RN7SL57P-201ENST00000493687 290 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AC008638.1-201ENST00000506035 866 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AC005351.1-201ENST00000511152 786 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AC010285.3-201ENST00000511668 676 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AL049779.3-201ENST00000557141 606 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 SULT1C2P2-201ENST00000562517 294 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AL589674.2-201ENST00000604304 337 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms