Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.19□□□□□ -1.74
USF2Q15853 AC009452.1-201ENST00000640823 606 ntBASIC4.19□□□□□ -1.74
USF2Q15853 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
USF2Q15853 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
USF2Q15853 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
USF2Q15853 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.19□□□□□ -1.74
USF2Q15853 AL356489.2-201ENST00000566968 3528 ntBASIC4.19□□□□□ -1.74
USF2Q15853 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
USF2Q15853 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
USF2Q15853 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.19□□□□□ -1.74
USF2Q15853 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.18□□□□□ -1.74
USF2Q15853 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USF2Q15853 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
USF2Q15853 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USF2Q15853 MTND4P26-201ENST00000415971 1359 ntBASIC4.18□□□□□ -1.74
USF2Q15853 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.18□□□□□ -1.74
USF2Q15853 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USF2Q15853 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
USF2Q15853 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
USF2Q15853 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USF2Q15853 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
USF2Q15853 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.18□□□□□ -1.74
USF2Q15853 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USF2Q15853 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USF2Q15853 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USF2Q15853 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
USF2Q15853 AC017019.1-201ENST00000426129 261 ntBASIC4.18□□□□□ -1.74
USF2Q15853 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.18□□□□□ -1.74
USF2Q15853 EEF1B2P6-201ENST00000445713 673 ntBASIC4.18□□□□□ -1.74
USF2Q15853 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.18□□□□□ -1.74
USF2Q15853 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.18□□□□□ -1.74
USF2Q15853 AC090804.1-201ENST00000448870 490 ntBASIC4.18□□□□□ -1.74
USF2Q15853 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.18□□□□□ -1.74
USF2Q15853 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USF2Q15853 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.18□□□□□ -1.74
USF2Q15853 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.18□□□□□ -1.74
USF2Q15853 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USF2Q15853 AC109481.1-201ENST00000509173 282 ntBASIC4.18□□□□□ -1.74
USF2Q15853 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.18□□□□□ -1.74
USF2Q15853 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.18□□□□□ -1.74
USF2Q15853 MTND6P2-201ENST00000512226 524 ntBASIC4.18□□□□□ -1.74
USF2Q15853 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USF2Q15853 RNA5SP497-201ENST00000516081 97 ntBASIC4.18□□□□□ -1.74
USF2Q15853 RNU2-30P-201ENST00000516209 141 ntBASIC4.18□□□□□ -1.74
USF2Q15853 CYCSP22-201ENST00000517555 339 ntBASIC4.18□□□□□ -1.74
USF2Q15853 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.18□□□□□ -1.74
USF2Q15853 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.18□□□□□ -1.74
USF2Q15853 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.18□□□□□ -1.74
USF2Q15853 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.18□□□□□ -1.74
USF2Q15853 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.18□□□□□ -1.74
USF2Q15853 RBM22P12-201ENST00000567098 1255 ntBASIC4.18□□□□□ -1.74
USF2Q15853 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.18□□□□□ -1.74
USF2Q15853 MIR4458-201ENST00000578872 75 ntBASIC4.18□□□□□ -1.74
USF2Q15853 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.18□□□□□ -1.74
USF2Q15853 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USF2Q15853 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.18□□□□□ -1.74
USF2Q15853 HMGB2P1-201ENST00000591146 634 ntBASIC4.18□□□□□ -1.74
USF2Q15853 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.18□□□□□ -1.74
USF2Q15853 RPL26P30-202ENST00000602923 645 ntBASIC4.18□□□□□ -1.74
USF2Q15853 IMMP1LP3-201ENST00000604197 224 ntBASIC4.18□□□□□ -1.74
USF2Q15853 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.18□□□□□ -1.74
USF2Q15853 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USF2Q15853 AL118522.2-201ENST00000616045 615 ntBASIC4.18□□□□□ -1.74
USF2Q15853 SNX18P1Y-201ENST00000616231 511 ntBASIC4.18□□□□□ -1.74
USF2Q15853 AP002505.2-201ENST00000623585 696 ntBASIC4.18□□□□□ -1.74
USF2Q15853 AL355480.1-201ENST00000629041 99 ntBASIC4.18□□□□□ -1.74
USF2Q15853 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.18□□□□□ -1.74
USF2Q15853 AC134882.1-201ENST00000603738 1676 ntBASIC4.18□□□□□ -1.74
USF2Q15853 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.18□□□□□ -1.74
USF2Q15853 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.18□□□□□ -1.74
USF2Q15853 MAPK10-303ENST00000641324 3959 ntBASIC4.18□□□□□ -1.74
USF2Q15853 AC012020.1-201ENST00000624541 1728 ntBASIC4.18□□□□□ -1.74
USF2Q15853 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USF2Q15853 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.18□□□□□ -1.74
USF2Q15853 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USF2Q15853 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USF2Q15853 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
USF2Q15853 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
USF2Q15853 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
USF2Q15853 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.17□□□□□ -1.74
USF2Q15853 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.17□□□□□ -1.74
USF2Q15853 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
USF2Q15853 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
USF2Q15853 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.17□□□□□ -1.74
USF2Q15853 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
USF2Q15853 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USF2Q15853 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USF2Q15853 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
USF2Q15853 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
USF2Q15853 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
USF2Q15853 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
USF2Q15853 DBIP1-201ENST00000401435 260 ntBASIC4.17□□□□□ -1.74
USF2Q15853 LAP3P1-201ENST00000403648 294 ntBASIC4.17□□□□□ -1.74
USF2Q15853 RPL12P9-201ENST00000412942 488 ntBASIC4.17□□□□□ -1.74
USF2Q15853 OR2AT2P-201ENST00000413438 905 ntBASIC4.17□□□□□ -1.74
USF2Q15853 AC007738.1-201ENST00000413892 348 ntBASIC4.17□□□□□ -1.74
USF2Q15853 AC093155.2-201ENST00000420734 937 ntBASIC4.17□□□□□ -1.74
USF2Q15853 AC006065.1-201ENST00000422539 802 ntBASIC4.17□□□□□ -1.74
USF2Q15853 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.17□□□□□ -1.74
USF2Q15853 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms