Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.27□□□□□ -1.73
LMO4P61968 AC107015.1-201ENST00000466902 747 ntBASIC4.27□□□□□ -1.73
LMO4P61968 RN7SL197P-201ENST00000466981 299 ntBASIC4.27□□□□□ -1.73
LMO4P61968 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.27□□□□□ -1.73
LMO4P61968 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.27□□□□□ -1.73
LMO4P61968 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LMO4P61968 RN7SL244P-201ENST00000493405 297 ntBASIC4.27□□□□□ -1.73
LMO4P61968 AC090058.1-201ENST00000498788 435 ntBASIC4.27□□□□□ -1.73
LMO4P61968 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.27□□□□□ -1.73
LMO4P61968 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.27□□□□□ -1.73
LMO4P61968 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
LMO4P61968 AC112198.4-201ENST00000515450 351 ntBASIC4.27□□□□□ -1.73
LMO4P61968 SEPT10P1-201ENST00000517342 1162 ntBASIC4.27□□□□□ -1.73
LMO4P61968 AC136777.2-201ENST00000522979 358 ntBASIC4.27□□□□□ -1.73
LMO4P61968 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.27□□□□□ -1.73
LMO4P61968 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.27□□□□□ -1.73
LMO4P61968 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMO4P61968 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.27□□□□□ -1.73
LMO4P61968 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.27□□□□□ -1.73
LMO4P61968 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.27□□□□□ -1.73
LMO4P61968 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LMO4P61968 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.27□□□□□ -1.73
LMO4P61968 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.27□□□□□ -1.73
LMO4P61968 AC025857.2-201ENST00000602711 238 ntBASIC4.27□□□□□ -1.73
LMO4P61968 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.27□□□□□ -1.73
LMO4P61968 AC087783.2-201ENST00000605070 562 ntBASIC4.27□□□□□ -1.73
LMO4P61968 AC004241.3-201ENST00000611728 517 ntBASIC4.27□□□□□ -1.73
LMO4P61968 MIR6133-201ENST00000617057 108 ntBASIC4.27□□□□□ -1.73
LMO4P61968 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.27□□□□□ -1.73
LMO4P61968 AC091953.3-201ENST00000623220 236 ntBASIC4.27□□□□□ -1.73
LMO4P61968 AL356863.1-201ENST00000623378 1080 ntBASIC4.27□□□□□ -1.73
LMO4P61968 AP006248.3-201ENST00000623580 594 ntBASIC4.27□□□□□ -1.73
LMO4P61968 AC099654.9-201ENST00000637055 678 ntBASIC4.27□□□□□ -1.73
LMO4P61968 AC119674.1-220ENST00000641502 1048 ntBASIC4.27□□□□□ -1.73
LMO4P61968 AC007996.1-201ENST00000620414 2821 ntBASIC4.27□□□□□ -1.73
LMO4P61968 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMO4P61968 CASC19-261ENST00000641853 1638 ntBASIC4.27□□□□□ -1.73
LMO4P61968 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMO4P61968 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMO4P61968 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LMO4P61968 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.27□□□□□ -1.73
LMO4P61968 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LMO4P61968 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMO4P61968 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMO4P61968 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
LMO4P61968 ABCC13-202ENST00000463099 3842 ntBASIC4.26□□□□□ -1.73
LMO4P61968 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.26□□□□□ -1.73
LMO4P61968 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.26□□□□□ -1.73
LMO4P61968 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
LMO4P61968 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.26□□□□□ -1.73
LMO4P61968 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.26□□□□□ -1.73
LMO4P61968 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LMO4P61968 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 RN7SKP95-201ENST00000362860 303 ntBASIC4.26□□□□□ -1.73
LMO4P61968 RNA5SP443-201ENST00000363083 132 ntBASIC4.26□□□□□ -1.73
LMO4P61968 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC4.26□□□□□ -1.73
LMO4P61968 AL035419.1-201ENST00000397037 564 ntBASIC4.26□□□□□ -1.73
LMO4P61968 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 AL512504.1-201ENST00000415494 778 ntBASIC4.26□□□□□ -1.73
LMO4P61968 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
LMO4P61968 OR2AM1P-201ENST00000422137 422 ntBASIC4.26□□□□□ -1.73
LMO4P61968 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.26□□□□□ -1.73
LMO4P61968 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.26□□□□□ -1.73
LMO4P61968 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.26□□□□□ -1.73
LMO4P61968 RNF19BPX-201ENST00000426224 625 ntBASIC4.26□□□□□ -1.73
LMO4P61968 AL049745.1-201ENST00000433953 286 ntBASIC4.26□□□□□ -1.73
LMO4P61968 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.26□□□□□ -1.73
LMO4P61968 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 AC099670.2-201ENST00000435130 321 ntBASIC4.26□□□□□ -1.73
LMO4P61968 AC016772.1-201ENST00000444170 1261 ntBASIC4.26□□□□□ -1.73
LMO4P61968 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.26□□□□□ -1.73
LMO4P61968 REG1CP-206ENST00000447469 496 ntBASIC4.26□□□□□ -1.73
LMO4P61968 AL157884.3-201ENST00000448273 1184 ntBASIC4.26□□□□□ -1.73
LMO4P61968 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.26□□□□□ -1.73
LMO4P61968 MORF4L1P4-201ENST00000450245 976 ntBASIC4.26□□□□□ -1.73
LMO4P61968 CLIC4P1-201ENST00000453177 535 ntBASIC4.26□□□□□ -1.73
LMO4P61968 RPL7P16-201ENST00000479738 738 ntBASIC4.26□□□□□ -1.73
LMO4P61968 LARP7P4-201ENST00000481075 878 ntBASIC4.26□□□□□ -1.73
LMO4P61968 AC083982.1-201ENST00000485679 344 ntBASIC4.26□□□□□ -1.73
LMO4P61968 RPS12P31-201ENST00000491419 398 ntBASIC4.26□□□□□ -1.73
LMO4P61968 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.26□□□□□ -1.73
LMO4P61968 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.26□□□□□ -1.73
LMO4P61968 COX6B1P5-201ENST00000509843 249 ntBASIC4.26□□□□□ -1.73
LMO4P61968 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
LMO4P61968 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.26□□□□□ -1.73
LMO4P61968 OR7E128P-201ENST00000532736 1024 ntBASIC4.26□□□□□ -1.73
LMO4P61968 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC4.26□□□□□ -1.73
LMO4P61968 HNRNPCP1-201ENST00000556181 766 ntBASIC4.26□□□□□ -1.73
LMO4P61968 AC027216.1-201ENST00000577726 685 ntBASIC4.26□□□□□ -1.73
LMO4P61968 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms