Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RPS3AP61247 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RPS3AP61247 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RPS3AP61247 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.19□□□□□ -1.58
RPS3AP61247 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
RPS3AP61247 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.19□□□□□ -1.58
RPS3AP61247 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RPS3AP61247 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RPS3AP61247 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPS3AP61247 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPS3AP61247 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.18□□□□□ -1.58
RPS3AP61247 OR13C1P-202ENST00000641378 2919 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.18□□□□□ -1.58
RPS3AP61247 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPS3AP61247 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.18□□□□□ -1.58
RPS3AP61247 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.18□□□□□ -1.58
RPS3AP61247 VN2R3P-201ENST00000422626 1412 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPS3AP61247 IGKV7-3-201ENST00000357453 298 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 MIR323A-201ENST00000362199 86 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 RN7SKP28-201ENST00000364770 305 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 RN7SKP292-201ENST00000365522 317 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPS3AP61247 AL359643.1-201ENST00000404109 423 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.18□□□□□ -1.58
RPS3AP61247 AC069282.1-201ENST00000411911 526 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 HMGB3P31-201ENST00000413333 595 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.18□□□□□ -1.58
RPS3AP61247 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.18□□□□□ -1.58
RPS3AP61247 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.18□□□□□ -1.58
RPS3AP61247 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.18□□□□□ -1.58
RPS3AP61247 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.18□□□□□ -1.58
RPS3AP61247 FTH1P16-201ENST00000435241 552 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.18□□□□□ -1.58
RPS3AP61247 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.18□□□□□ -1.58
RPS3AP61247 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.18□□□□□ -1.58
RPS3AP61247 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.18□□□□□ -1.58
RPS3AP61247 MED6P1-201ENST00000439659 713 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 HMGN1P5-201ENST00000448591 263 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 OR52E3P-201ENST00000452083 936 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 SETP20-201ENST00000457046 852 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 AC021660.1-201ENST00000465006 554 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.18□□□□□ -1.58
RPS3AP61247 NAMPTP2-201ENST00000505629 1115 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 AC105384.2-201ENST00000508433 640 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.18□□□□□ -1.58
RPS3AP61247 AC021678.3-201ENST00000517893 476 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.18□□□□□ -1.58
RPS3AP61247 AP006245.2-201ENST00000522004 300 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.18□□□□□ -1.58
RPS3AP61247 AP003717.3-201ENST00000544832 1180 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.18□□□□□ -1.58
RPS3AP61247 MIR3614-201ENST00000581261 86 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 AC012254.4-201ENST00000588843 273 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 AC027243.2-201ENST00000602530 724 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 NANOGP3-201ENST00000605855 286 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.18□□□□□ -1.58
RPS3AP61247 AC078880.5-201ENST00000617845 421 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 AC139769.3-201ENST00000618383 175 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.18□□□□□ -1.58
RPS3AP61247 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.18□□□□□ -1.58
RPS3AP61247 AC132825.7-201ENST00000638744 335 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RPS3AP61247 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.18□□□□□ -1.58
RPS3AP61247 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RPS3AP61247 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPS3AP61247 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPS3AP61247 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPS3AP61247 AC006206.1-201ENST00000544842 3387 ntBASIC5.18□□□□□ -1.58
RPS3AP61247 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
RPS3AP61247 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.17□□□□□ -1.58
RPS3AP61247 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.17□□□□□ -1.58
RPS3AP61247 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.17□□□□□ -1.58
RPS3AP61247 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.17□□□□□ -1.58
RPS3AP61247 RNU1-136P-201ENST00000384181 164 ntBASIC5.17□□□□□ -1.58
RPS3AP61247 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RPS3AP61247 HMGB1P20-201ENST00000402555 677 ntBASIC5.17□□□□□ -1.58
RPS3AP61247 HMGB3P19-201ENST00000403971 560 ntBASIC5.17□□□□□ -1.58
RPS3AP61247 AL357752.1-201ENST00000412817 349 ntBASIC5.17□□□□□ -1.58
RPS3AP61247 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.17□□□□□ -1.58
RPS3AP61247 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.17□□□□□ -1.58
RPS3AP61247 AC073310.1-201ENST00000423226 1033 ntBASIC5.17□□□□□ -1.58
RPS3AP61247 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.17□□□□□ -1.58
RPS3AP61247 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.17□□□□□ -1.58
RPS3AP61247 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.17□□□□□ -1.58
RPS3AP61247 AC092447.2-201ENST00000435487 669 ntBASIC5.17□□□□□ -1.58
RPS3AP61247 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.17□□□□□ -1.58
RPS3AP61247 RPL7P29-201ENST00000437151 728 ntBASIC5.17□□□□□ -1.58
RPS3AP61247 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.17□□□□□ -1.58
RPS3AP61247 AC064862.4-201ENST00000442180 334 ntBASIC5.17□□□□□ -1.58
RPS3AP61247 RPL36AP39-201ENST00000445859 318 ntBASIC5.17□□□□□ -1.58
RPS3AP61247 AC099063.2-201ENST00000446360 662 ntBASIC5.17□□□□□ -1.58
RPS3AP61247 HMGN1P36-201ENST00000446623 298 ntBASIC5.17□□□□□ -1.58
RPS3AP61247 AC005229.2-201ENST00000456995 399 ntBASIC5.17□□□□□ -1.58
RPS3AP61247 RNU6-1218P-201ENST00000458990 108 ntBASIC5.17□□□□□ -1.58
RPS3AP61247 AC087672.1-201ENST00000479876 766 ntBASIC5.17□□□□□ -1.58
RPS3AP61247 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.17□□□□□ -1.58
RPS3AP61247 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.17□□□□□ -1.58
RPS3AP61247 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms