Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
ACTBP60709 AP005131.7-201ENST00000610087 611 ntBASIC4.32□□□□□ -1.72
ACTBP60709 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
ACTBP60709 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ACTBP60709 AC010329.2-201ENST00000595195 2737 ntBASIC4.32□□□□□ -1.72
ACTBP60709 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
ACTBP60709 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
ACTBP60709 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ACTBP60709 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
ACTBP60709 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ACTBP60709 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
ACTBP60709 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
ACTBP60709 BX005019.1-201ENST00000561881 1810 ntBASIC4.31□□□□□ -1.72
ACTBP60709 OR10J6P-201ENST00000289731 930 ntBASIC4.31□□□□□ -1.72
ACTBP60709 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ACTBP60709 MIR133B-201ENST00000362210 119 ntBASIC4.31□□□□□ -1.72
ACTBP60709 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ACTBP60709 SNORA2.3-201ENST00000383920 135 ntBASIC4.31□□□□□ -1.72
ACTBP60709 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
ACTBP60709 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ACTBP60709 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.31□□□□□ -1.72
ACTBP60709 GABARAPL3-201ENST00000412799 354 ntBASIC4.31□□□□□ -1.72
ACTBP60709 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.31□□□□□ -1.72
ACTBP60709 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.31□□□□□ -1.72
ACTBP60709 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.31□□□□□ -1.72
ACTBP60709 RPS26P47-201ENST00000427219 348 ntBASIC4.31□□□□□ -1.72
ACTBP60709 RPS26P2-201ENST00000440331 348 ntBASIC4.31□□□□□ -1.72
ACTBP60709 ARL4AP3-201ENST00000441452 574 ntBASIC4.31□□□□□ -1.72
ACTBP60709 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.31□□□□□ -1.72
ACTBP60709 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.31□□□□□ -1.72
ACTBP60709 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ACTBP60709 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.31□□□□□ -1.72
ACTBP60709 MTND6P32-201ENST00000457611 483 ntBASIC4.31□□□□□ -1.72
ACTBP60709 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ACTBP60709 AL136038.1-201ENST00000497246 351 ntBASIC4.31□□□□□ -1.72
ACTBP60709 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.31□□□□□ -1.72
ACTBP60709 NDUFB4P12-201ENST00000513465 390 ntBASIC4.31□□□□□ -1.72
ACTBP60709 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.31□□□□□ -1.72
ACTBP60709 IGLVIV-64-201ENST00000518581 301 ntBASIC4.31□□□□□ -1.72
ACTBP60709 HMGB1P40-201ENST00000525121 540 ntBASIC4.31□□□□□ -1.72
ACTBP60709 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ACTBP60709 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.31□□□□□ -1.72
ACTBP60709 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ACTBP60709 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ACTBP60709 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ACTBP60709 MTND2P13-201ENST00000577438 1039 ntBASIC4.31□□□□□ -1.72
ACTBP60709 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.31□□□□□ -1.72
ACTBP60709 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.31□□□□□ -1.72
ACTBP60709 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.31□□□□□ -1.72
ACTBP60709 SUGT1P3-202ENST00000604259 383 ntBASIC4.31□□□□□ -1.72
ACTBP60709 AL713998.2-201ENST00000604538 1198 ntBASIC4.31□□□□□ -1.72
ACTBP60709 AL353600.1-201ENST00000608148 251 ntBASIC4.31□□□□□ -1.72
ACTBP60709 AC135068.12-201ENST00000637370 931 ntBASIC4.31□□□□□ -1.72
ACTBP60709 AC074101.1-201ENST00000637861 241 ntBASIC4.31□□□□□ -1.72
ACTBP60709 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ACTBP60709 AC087190.4-201ENST00000574616 8334 ntBASIC4.31□□□□□ -1.72
ACTBP60709 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
ACTBP60709 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ACTBP60709 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ACTBP60709 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ACTBP60709 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.3□□□□□ -1.72
ACTBP60709 MAPK10-303ENST00000641324 3959 ntBASIC4.3□□□□□ -1.72
ACTBP60709 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ACTBP60709 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.3□□□□□ -1.72
ACTBP60709 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ACTBP60709 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ACTBP60709 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ACTBP60709 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ACTBP60709 SNORA73.1-201ENST00000363107 205 ntBASIC4.3□□□□□ -1.72
ACTBP60709 RNA5SP335-201ENST00000363817 110 ntBASIC4.3□□□□□ -1.72
ACTBP60709 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ACTBP60709 MIR708-201ENST00000390708 88 ntBASIC4.3□□□□□ -1.72
ACTBP60709 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ACTBP60709 AL512422.1-201ENST00000407033 553 ntBASIC4.3□□□□□ -1.72
ACTBP60709 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ACTBP60709 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.3□□□□□ -1.72
ACTBP60709 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.3□□□□□ -1.72
ACTBP60709 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.3□□□□□ -1.72
ACTBP60709 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.3□□□□□ -1.72
ACTBP60709 FHP1-201ENST00000442741 703 ntBASIC4.3□□□□□ -1.72
ACTBP60709 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.3□□□□□ -1.72
ACTBP60709 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.3□□□□□ -1.72
ACTBP60709 RPL7P45-201ENST00000455851 743 ntBASIC4.3□□□□□ -1.72
ACTBP60709 AC018638.3-201ENST00000461273 132 ntBASIC4.3□□□□□ -1.72
ACTBP60709 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.3□□□□□ -1.72
ACTBP60709 RN7SL547P-201ENST00000490793 290 ntBASIC4.3□□□□□ -1.72
ACTBP60709 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.3□□□□□ -1.72
ACTBP60709 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ACTBP60709 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.3□□□□□ -1.72
ACTBP60709 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.3□□□□□ -1.72
ACTBP60709 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.3□□□□□ -1.72
ACTBP60709 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.3□□□□□ -1.72
ACTBP60709 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ACTBP60709 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ACTBP60709 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.3□□□□□ -1.72
ACTBP60709 RN7SL52P-201ENST00000584271 284 ntBASIC4.3□□□□□ -1.72
ACTBP60709 AC015849.6-201ENST00000605454 474 ntBASIC4.3□□□□□ -1.72
ACTBP60709 AC090948.2-201ENST00000607363 564 ntBASIC4.3□□□□□ -1.72
ACTBP60709 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ACTBP60709 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms