Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MRPL35P4-201ENST00000453682 566 ntBASIC4.97□□□□□ -1.61
SOX2P48431 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SOX2P48431 CDC42P1-201ENST00000456658 548 ntBASIC4.97□□□□□ -1.61
SOX2P48431 USP9YP25-201ENST00000457708 443 ntBASIC4.97□□□□□ -1.61
SOX2P48431 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.97□□□□□ -1.61
SOX2P48431 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.97□□□□□ -1.61
SOX2P48431 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.97□□□□□ -1.61
SOX2P48431 AC113367.2-201ENST00000505749 160 ntBASIC4.97□□□□□ -1.61
SOX2P48431 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.97□□□□□ -1.61
SOX2P48431 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.97□□□□□ -1.61
SOX2P48431 AC020937.1-201ENST00000519677 1013 ntBASIC4.97□□□□□ -1.61
SOX2P48431 MTCO3P15-201ENST00000526563 574 ntBASIC4.97□□□□□ -1.61
SOX2P48431 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.97□□□□□ -1.61
SOX2P48431 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SOX2P48431 OR4A43P-201ENST00000532938 908 ntBASIC4.97□□□□□ -1.61
SOX2P48431 DUXAP6-201ENST00000553858 601 ntBASIC4.97□□□□□ -1.61
SOX2P48431 AC091078.2-201ENST00000557145 559 ntBASIC4.97□□□□□ -1.61
SOX2P48431 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.97□□□□□ -1.61
SOX2P48431 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.97□□□□□ -1.61
SOX2P48431 AC015688.2-201ENST00000584523 262 ntBASIC4.97□□□□□ -1.61
SOX2P48431 AL353778.1-201ENST00000603149 408 ntBASIC4.97□□□□□ -1.61
SOX2P48431 AC021749.1-201ENST00000604322 607 ntBASIC4.97□□□□□ -1.61
SOX2P48431 AL135786.2-201ENST00000608422 615 ntBASIC4.97□□□□□ -1.61
SOX2P48431 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.97□□□□□ -1.61
SOX2P48431 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.97□□□□□ -1.61
SOX2P48431 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SOX2P48431 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SOX2P48431 AC015819.1-201ENST00000613588 663 ntBASIC4.97□□□□□ -1.61
SOX2P48431 AL136228.1-201ENST00000622221 319 ntBASIC4.97□□□□□ -1.61
SOX2P48431 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.97□□□□□ -1.61
SOX2P48431 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.97□□□□□ -1.61
SOX2P48431 AC068137.4-201ENST00000638485 296 ntBASIC4.97□□□□□ -1.61
SOX2P48431 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SOX2P48431 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SOX2P48431 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
SOX2P48431 AP005435.3-201ENST00000531260 3198 ntBASIC4.97□□□□□ -1.61
SOX2P48431 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SOX2P48431 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
SOX2P48431 AC009962.1-201ENST00000567327 3813 ntBASIC4.97□□□□□ -1.61
SOX2P48431 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SOX2P48431 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SOX2P48431 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SOX2P48431 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SOX2P48431 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.97□□□□□ -1.61
SOX2P48431 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SOX2P48431 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SOX2P48431 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.97□□□□□ -1.61
SOX2P48431 AC093671.1-201ENST00000624981 2929 ntBASIC4.96□□□□□ -1.61
SOX2P48431 OR4F13P-202ENST00000560066 2054 ntBASIC4.96□□□□□ -1.61
SOX2P48431 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.96□□□□□ -1.61
SOX2P48431 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
SOX2P48431 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SOX2P48431 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.96□□□□□ -1.61
SOX2P48431 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX2P48431 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX2P48431 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.96□□□□□ -1.62
SOX2P48431 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SOX2P48431 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.96□□□□□ -1.62
SOX2P48431 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX2P48431 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SOX2P48431 ENSAP3-201ENST00000312710 333 ntBASIC4.96□□□□□ -1.62
SOX2P48431 YWHAZP6-201ENST00000399764 738 ntBASIC4.96□□□□□ -1.62
SOX2P48431 AC016739.1-201ENST00000405359 345 ntBASIC4.96□□□□□ -1.62
SOX2P48431 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC4.96□□□□□ -1.62
SOX2P48431 RN7SKP29-201ENST00000410957 272 ntBASIC4.96□□□□□ -1.62
SOX2P48431 AL357752.1-201ENST00000412817 349 ntBASIC4.96□□□□□ -1.62
SOX2P48431 TCEA1P4-201ENST00000415066 844 ntBASIC4.96□□□□□ -1.62
SOX2P48431 AC079809.1-201ENST00000415468 276 ntBASIC4.96□□□□□ -1.62
SOX2P48431 ELOCP9-201ENST00000418624 239 ntBASIC4.96□□□□□ -1.62
SOX2P48431 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.96□□□□□ -1.62
SOX2P48431 AC009784.1-201ENST00000426484 460 ntBASIC4.96□□□□□ -1.62
SOX2P48431 RAC1P8-201ENST00000427086 527 ntBASIC4.96□□□□□ -1.62
SOX2P48431 YWHAEP5-201ENST00000431545 765 ntBASIC4.96□□□□□ -1.62
SOX2P48431 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX2P48431 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX2P48431 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX2P48431 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.96□□□□□ -1.62
SOX2P48431 SNORD125-201ENST00000459538 96 ntBASIC4.96□□□□□ -1.62
SOX2P48431 RN7SL254P-201ENST00000460609 284 ntBASIC4.96□□□□□ -1.62
SOX2P48431 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX2P48431 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.96□□□□□ -1.62
SOX2P48431 AC098847.1-201ENST00000473094 348 ntBASIC4.96□□□□□ -1.62
SOX2P48431 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX2P48431 RPL23AP37-201ENST00000479658 549 ntBASIC4.96□□□□□ -1.62
SOX2P48431 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX2P48431 RPS17P5-201ENST00000498293 408 ntBASIC4.96□□□□□ -1.62
SOX2P48431 AC093890.1-201ENST00000502554 540 ntBASIC4.96□□□□□ -1.62
SOX2P48431 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SOX2P48431 AC091860.1-201ENST00000505723 432 ntBASIC4.96□□□□□ -1.62
SOX2P48431 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SOX2P48431 AC104108.1-201ENST00000509930 412 ntBASIC4.96□□□□□ -1.62
SOX2P48431 MTCO3P28-201ENST00000513351 515 ntBASIC4.96□□□□□ -1.62
SOX2P48431 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.96□□□□□ -1.62
SOX2P48431 AC139365.2-201ENST00000517972 253 ntBASIC4.96□□□□□ -1.62
SOX2P48431 IGLV3-30-201ENST00000524362 298 ntBASIC4.96□□□□□ -1.62
SOX2P48431 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX2P48431 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SOX2P48431 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SOX2P48431 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX2P48431 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms