Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.51□□□□□ -1.69
CDX1P47902 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDX1P47902 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
CDX1P47902 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CDX1P47902 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDX1P47902 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CDX1P47902 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.51□□□□□ -1.69
CDX1P47902 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDX1P47902 STX3-208ENST00000641815 3236 ntBASIC4.51□□□□□ -1.69
CDX1P47902 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
CDX1P47902 AL592494.2-201ENST00000425455 1548 ntBASIC4.51□□□□□ -1.69
CDX1P47902 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDX1P47902 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CDX1P47902 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDX1P47902 HSPA8P18-201ENST00000439846 1928 ntBASIC4.5□□□□□ -1.69
CDX1P47902 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.5□□□□□ -1.69
CDX1P47902 AC008432.1-201ENST00000615912 1320 ntBASIC4.5□□□□□ -1.69
CDX1P47902 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CDX1P47902 AC000123.3-201ENST00000624029 4975 ntBASIC4.5□□□□□ -1.69
CDX1P47902 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.5□□□□□ -1.69
CDX1P47902 HSPD1P11-201ENST00000508643 1702 ntBASIC4.5□□□□□ -1.69
CDX1P47902 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDX1P47902 AC104964.3-201ENST00000606115 2860 ntBASIC4.5□□□□□ -1.69
CDX1P47902 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.5□□□□□ -1.69
CDX1P47902 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDX1P47902 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDX1P47902 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.5□□□□□ -1.69
CDX1P47902 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.5□□□□□ -1.69
CDX1P47902 SNORA63.3-201ENST00000362682 132 ntBASIC4.5□□□□□ -1.69
CDX1P47902 MIR92A2-201ENST00000385299 75 ntBASIC4.5□□□□□ -1.69
CDX1P47902 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.5□□□□□ -1.69
CDX1P47902 VTA1P1-201ENST00000414044 866 ntBASIC4.5□□□□□ -1.69
CDX1P47902 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.5□□□□□ -1.69
CDX1P47902 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.5□□□□□ -1.69
CDX1P47902 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.5□□□□□ -1.69
CDX1P47902 AC099336.2-201ENST00000422457 254 ntBASIC4.5□□□□□ -1.69
CDX1P47902 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.5□□□□□ -1.69
CDX1P47902 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.5□□□□□ -1.69
CDX1P47902 MTCO1P43-201ENST00000431831 488 ntBASIC4.5□□□□□ -1.69
CDX1P47902 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CDX1P47902 AC092013.1-201ENST00000438795 332 ntBASIC4.5□□□□□ -1.69
CDX1P47902 AL391987.1-201ENST00000441025 200 ntBASIC4.5□□□□□ -1.69
CDX1P47902 RPL36AP39-201ENST00000445859 318 ntBASIC4.5□□□□□ -1.69
CDX1P47902 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.5□□□□□ -1.69
CDX1P47902 PPIAP20-201ENST00000449839 135 ntBASIC4.5□□□□□ -1.69
CDX1P47902 AC099560.2-201ENST00000457554 255 ntBASIC4.5□□□□□ -1.69
CDX1P47902 AC245028.2-201ENST00000458673 253 ntBASIC4.5□□□□□ -1.69
CDX1P47902 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.5□□□□□ -1.69
CDX1P47902 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.5□□□□□ -1.69
CDX1P47902 SETP6-201ENST00000479329 568 ntBASIC4.5□□□□□ -1.69
CDX1P47902 RPL38P3-201ENST00000484463 213 ntBASIC4.5□□□□□ -1.69
CDX1P47902 AC090638.1-201ENST00000498296 909 ntBASIC4.5□□□□□ -1.69
CDX1P47902 OR5H3P-201ENST00000502817 919 ntBASIC4.5□□□□□ -1.69
CDX1P47902 AC106872.4-201ENST00000510050 523 ntBASIC4.5□□□□□ -1.69
CDX1P47902 SCARNA6.1-201ENST00000516989 238 ntBASIC4.5□□□□□ -1.69
CDX1P47902 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.5□□□□□ -1.69
CDX1P47902 AL121594.2-201ENST00000541658 472 ntBASIC4.5□□□□□ -1.69
CDX1P47902 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.5□□□□□ -1.69
CDX1P47902 AC104229.1-201ENST00000561364 255 ntBASIC4.5□□□□□ -1.69
CDX1P47902 AC114947.2-201ENST00000565748 2125 ntBASIC4.5□□□□□ -1.69
CDX1P47902 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
CDX1P47902 RN7SL435P-201ENST00000584418 282 ntBASIC4.5□□□□□ -1.69
CDX1P47902 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.5□□□□□ -1.69
CDX1P47902 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.5□□□□□ -1.69
CDX1P47902 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CDX1P47902 AC245100.7-201ENST00000609678 442 ntBASIC4.5□□□□□ -1.69
CDX1P47902 AC087565.3-203ENST00000641018 837 ntBASIC4.5□□□□□ -1.69
CDX1P47902 OR11H2-202ENST00000641517 1085 ntBASIC4.5□□□□□ -1.69
CDX1P47902 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDX1P47902 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.5□□□□□ -1.69
CDX1P47902 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDX1P47902 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDX1P47902 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.5□□□□□ -1.69
CDX1P47902 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDX1P47902 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDX1P47902 MRE11P1-201ENST00000464884 2127 ntBASIC4.49□□□□□ -1.69
CDX1P47902 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDX1P47902 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDX1P47902 NEAT1-202ENST00000501122 22743 ntBASIC4.49□□□□□ -1.69
CDX1P47902 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CDX1P47902 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.49□□□□□ -1.69
CDX1P47902 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDX1P47902 AL022393.1-201ENST00000625142 1677 ntBASIC4.49□□□□□ -1.69
CDX1P47902 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDX1P47902 METTL21EP-201ENST00000298105 713 ntBASIC4.49□□□□□ -1.69
CDX1P47902 RNA5SP46-201ENST00000362370 120 ntBASIC4.49□□□□□ -1.69
CDX1P47902 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDX1P47902 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CDX1P47902 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.49□□□□□ -1.69
CDX1P47902 MIR143-201ENST00000385300 106 ntBASIC4.49□□□□□ -1.69
CDX1P47902 AL590290.1-201ENST00000405336 380 ntBASIC4.49□□□□□ -1.69
CDX1P47902 AC008173.1-201ENST00000418901 264 ntBASIC4.49□□□□□ -1.69
CDX1P47902 AL590609.2-201ENST00000421430 368 ntBASIC4.49□□□□□ -1.69
CDX1P47902 CHEK2P5-201ENST00000423877 246 ntBASIC4.49□□□□□ -1.69
CDX1P47902 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.49□□□□□ -1.69
CDX1P47902 HMGB3P24-201ENST00000433260 622 ntBASIC4.49□□□□□ -1.69
CDX1P47902 AC096775.1-201ENST00000437724 448 ntBASIC4.49□□□□□ -1.69
CDX1P47902 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDX1P47902 YWHAEP1-201ENST00000453697 763 ntBASIC4.49□□□□□ -1.69
CDX1P47902 AC093166.4-201ENST00000457867 318 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms