Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.44□□□□□ -1.7
NKX2-1P43699 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX2-1P43699 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.44□□□□□ -1.7
NKX2-1P43699 IGLV3-30-201ENST00000524362 298 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 AP003066.2-201ENST00000529375 555 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 PCNAP4-201ENST00000532690 730 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX2-1P43699 HSPE1P2-201ENST00000554777 306 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 AL845552.1-201ENST00000556820 323 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 AC084759.1-201ENST00000561168 290 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX2-1P43699 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.44□□□□□ -1.7
NKX2-1P43699 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.44□□□□□ -1.7
NKX2-1P43699 AC002310.3-201ENST00000569728 723 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX2-1P43699 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.44□□□□□ -1.7
NKX2-1P43699 AC023762.1-201ENST00000603280 584 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 FAM27E4-201ENST00000605259 342 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 AL158050.2-201ENST00000605336 568 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 AL359091.2-201ENST00000609303 556 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 AC092266.1-201ENST00000610958 165 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 VN1R9P-201ENST00000614184 867 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 RMST_10.1-201ENST00000616309 154 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 AC048341.3-201ENST00000619323 491 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 AC011815.3-201ENST00000624194 473 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.44□□□□□ -1.7
NKX2-1P43699 AL356118.1-201ENST00000635272 1078 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.44□□□□□ -1.7
NKX2-1P43699 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NKX2-1P43699 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.44□□□□□ -1.7
NKX2-1P43699 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NKX2-1P43699 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.44□□□□□ -1.7
NKX2-1P43699 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.44□□□□□ -1.7
NKX2-1P43699 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.44□□□□□ -1.7
NKX2-1P43699 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
NKX2-1P43699 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.43□□□□□ -1.7
NKX2-1P43699 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-1P43699 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-1P43699 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.43□□□□□ -1.7
NKX2-1P43699 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.43□□□□□ -1.7
NKX2-1P43699 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.43□□□□□ -1.7
NKX2-1P43699 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-1P43699 AC017007.4-201ENST00000503353 1352 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NKX2-1P43699 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-1P43699 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
NKX2-1P43699 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.43□□□□□ -1.7
NKX2-1P43699 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.43□□□□□ -1.7
NKX2-1P43699 SNORA62.2-201ENST00000364672 152 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.43□□□□□ -1.7
NKX2-1P43699 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.43□□□□□ -1.7
NKX2-1P43699 RNU6-354P-201ENST00000383862 107 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 RNU6-610P-201ENST00000384264 107 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 SNORA51.9-201ENST00000384295 124 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NKX2-1P43699 RNA5SP296-201ENST00000410523 111 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 HMGB3P31-201ENST00000413333 595 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 VTA1P1-201ENST00000414044 866 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.43□□□□□ -1.7
NKX2-1P43699 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.43□□□□□ -1.7
NKX2-1P43699 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.43□□□□□ -1.7
NKX2-1P43699 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.43□□□□□ -1.7
NKX2-1P43699 AC106883.1-201ENST00000418805 562 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 AC115285.1-201ENST00000424879 736 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.43□□□□□ -1.7
NKX2-1P43699 AC006994.1-201ENST00000438212 839 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.43□□□□□ -1.7
NKX2-1P43699 GTF3AP5-201ENST00000442645 697 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.43□□□□□ -1.7
NKX2-1P43699 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.43□□□□□ -1.7
NKX2-1P43699 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.43□□□□□ -1.7
NKX2-1P43699 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.43□□□□□ -1.7
NKX2-1P43699 AC118758.1-202ENST00000454719 225 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.43□□□□□ -1.7
NKX2-1P43699 AC110749.1-201ENST00000462007 357 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.43□□□□□ -1.7
NKX2-1P43699 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-1P43699 AC022133.1-201ENST00000490961 571 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.43□□□□□ -1.7
NKX2-1P43699 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.43□□□□□ -1.7
NKX2-1P43699 AC010460.2-201ENST00000509054 677 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.43□□□□□ -1.7
NKX2-1P43699 HSD3BP3-201ENST00000514706 994 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 SCARNA18.1-201ENST00000516330 83 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 AC010476.1-201ENST00000519111 851 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.43□□□□□ -1.7
NKX2-1P43699 OR5AK3P-201ENST00000527486 1297 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 HMGN2P36-201ENST00000529541 409 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 AP002812.4-201ENST00000532139 286 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 AP003717.3-201ENST00000544832 1180 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-1P43699 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms