Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.4□□□□□ -1.54
SSR1P43307 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.4□□□□□ -1.54
SSR1P43307 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.4□□□□□ -1.54
SSR1P43307 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.4□□□□□ -1.54
SSR1P43307 Z92846.1-201ENST00000456203 268 ntBASIC5.4□□□□□ -1.54
SSR1P43307 AC021660.1-201ENST00000465006 554 ntBASIC5.4□□□□□ -1.54
SSR1P43307 RPL7P39-201ENST00000481157 744 ntBASIC5.4□□□□□ -1.54
SSR1P43307 AC015864.1-201ENST00000496512 544 ntBASIC5.4□□□□□ -1.54
SSR1P43307 BX510359.5-201ENST00000515651 304 ntBASIC5.4□□□□□ -1.54
SSR1P43307 BNIP3P1-201ENST00000547295 580 ntBASIC5.4□□□□□ -1.54
SSR1P43307 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.4□□□□□ -1.54
SSR1P43307 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.4□□□□□ -1.54
SSR1P43307 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.4□□□□□ -1.54
SSR1P43307 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.4□□□□□ -1.54
SSR1P43307 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.4□□□□□ -1.54
SSR1P43307 AC037198.3-201ENST00000616754 526 ntBASIC5.4□□□□□ -1.54
SSR1P43307 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.4□□□□□ -1.55
SSR1P43307 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SSR1P43307 AC011493.1-201ENST00000596753 1632 ntBASIC5.4□□□□□ -1.55
SSR1P43307 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SSR1P43307 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SSR1P43307 AL022393.1-201ENST00000625142 1677 ntBASIC5.4□□□□□ -1.55
SSR1P43307 AC007390.2-201ENST00000606229 3803 ntBASIC5.4□□□□□ -1.55
SSR1P43307 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SSR1P43307 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSR1P43307 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSR1P43307 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.39□□□□□ -1.55
SSR1P43307 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSR1P43307 AC007996.1-201ENST00000620414 2821 ntBASIC5.39□□□□□ -1.55
SSR1P43307 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSR1P43307 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
SSR1P43307 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSR1P43307 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSR1P43307 DDX18P4-201ENST00000511690 1966 ntBASIC5.39□□□□□ -1.55
SSR1P43307 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.39□□□□□ -1.55
SSR1P43307 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SSR1P43307 U3.3-201ENST00000362986 216 ntBASIC5.39□□□□□ -1.55
SSR1P43307 RN7SKP15-201ENST00000364742 309 ntBASIC5.39□□□□□ -1.55
SSR1P43307 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.39□□□□□ -1.55
SSR1P43307 OR3A2-201ENST00000408891 1076 ntBASIC5.39□□□□□ -1.55
SSR1P43307 RN7SKP125-201ENST00000410481 302 ntBASIC5.39□□□□□ -1.55
SSR1P43307 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.39□□□□□ -1.55
SSR1P43307 AC093655.2-201ENST00000425735 631 ntBASIC5.39□□□□□ -1.55
SSR1P43307 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.39□□□□□ -1.55
SSR1P43307 GAPDHP34-201ENST00000432112 823 ntBASIC5.39□□□□□ -1.55
SSR1P43307 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.39□□□□□ -1.55
SSR1P43307 AC093166.2-201ENST00000455969 1017 ntBASIC5.39□□□□□ -1.55
SSR1P43307 AC026348.1-201ENST00000462549 1053 ntBASIC5.39□□□□□ -1.55
SSR1P43307 OR2AO1P-201ENST00000476497 403 ntBASIC5.39□□□□□ -1.55
SSR1P43307 RN7SL727P-201ENST00000482164 296 ntBASIC5.39□□□□□ -1.55
SSR1P43307 AC108693.1-201ENST00000496068 432 ntBASIC5.39□□□□□ -1.55
SSR1P43307 AC097173.1-201ENST00000505862 819 ntBASIC5.39□□□□□ -1.55
SSR1P43307 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.39□□□□□ -1.55
SSR1P43307 DEFB109D-201ENST00000529497 240 ntBASIC5.39□□□□□ -1.55
SSR1P43307 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.39□□□□□ -1.55
SSR1P43307 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.39□□□□□ -1.55
SSR1P43307 FKBP1AP1-201ENST00000594588 318 ntBASIC5.39□□□□□ -1.55
SSR1P43307 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.39□□□□□ -1.55
SSR1P43307 MIR6837-201ENST00000620884 64 ntBASIC5.39□□□□□ -1.55
SSR1P43307 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.39□□□□□ -1.55
SSR1P43307 AL356121.2-201ENST00000624715 780 ntBASIC5.39□□□□□ -1.55
SSR1P43307 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.39□□□□□ -1.55
SSR1P43307 AC009950.2-201ENST00000636548 183 ntBASIC5.39□□□□□ -1.55
SSR1P43307 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
SSR1P43307 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.39□□□□□ -1.55
SSR1P43307 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SSR1P43307 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SSR1P43307 AC235565.1-201ENST00000456962 1325 ntBASIC5.39□□□□□ -1.55
SSR1P43307 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSR1P43307 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSR1P43307 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.39□□□□□ -1.55
SSR1P43307 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.39□□□□□ -1.55
SSR1P43307 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.39□□□□□ -1.55
SSR1P43307 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.38□□□□□ -1.55
SSR1P43307 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.38□□□□□ -1.55
SSR1P43307 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSR1P43307 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSR1P43307 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SSR1P43307 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
SSR1P43307 MAPK10-320ENST00000641462 6696 ntBASIC5.38□□□□□ -1.55
SSR1P43307 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSR1P43307 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSR1P43307 AC099336.2-201ENST00000422457 254 ntBASIC5.38□□□□□ -1.55
SSR1P43307 RWDD4P2-201ENST00000426392 563 ntBASIC5.38□□□□□ -1.55
SSR1P43307 AC009238.2-201ENST00000431026 355 ntBASIC5.38□□□□□ -1.55
SSR1P43307 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.38□□□□□ -1.55
SSR1P43307 SPRYD7P1-201ENST00000443861 570 ntBASIC5.38□□□□□ -1.55
SSR1P43307 AL157385.1-201ENST00000446973 268 ntBASIC5.38□□□□□ -1.55
SSR1P43307 AC099560.2-201ENST00000457554 255 ntBASIC5.38□□□□□ -1.55
SSR1P43307 RN7SL443P-201ENST00000464331 290 ntBASIC5.38□□□□□ -1.55
SSR1P43307 RN7SL174P-201ENST00000475578 289 ntBASIC5.38□□□□□ -1.55
SSR1P43307 RWDD4P1-201ENST00000488019 565 ntBASIC5.38□□□□□ -1.55
SSR1P43307 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.38□□□□□ -1.55
SSR1P43307 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.38□□□□□ -1.55
SSR1P43307 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.38□□□□□ -1.55
SSR1P43307 IGLVIV-64-201ENST00000518581 301 ntBASIC5.38□□□□□ -1.55
SSR1P43307 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.38□□□□□ -1.55
SSR1P43307 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.38□□□□□ -1.55
SSR1P43307 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.38□□□□□ -1.55
SSR1P43307 AL049779.2-201ENST00000553847 315 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms