Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
GRIK1P39086 RNA5SP441-201ENST00000516809 88 ntBASIC6.8□□□□□ -1.32
GRIK1P39086 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.8□□□□□ -1.32
GRIK1P39086 DEFB108A-201ENST00000530110 222 ntBASIC6.8□□□□□ -1.32
GRIK1P39086 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.8□□□□□ -1.32
GRIK1P39086 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.8□□□□□ -1.32
GRIK1P39086 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.8□□□□□ -1.32
GRIK1P39086 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.8□□□□□ -1.32
GRIK1P39086 MIR4271-201ENST00000582451 67 ntBASIC6.8□□□□□ -1.32
GRIK1P39086 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
GRIK1P39086 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.8□□□□□ -1.32
GRIK1P39086 AC073046.2-201ENST00000604756 527 ntBASIC6.8□□□□□ -1.32
GRIK1P39086 AC018714.1-201ENST00000605028 208 ntBASIC6.8□□□□□ -1.32
GRIK1P39086 AL589743.7-201ENST00000612637 233 ntBASIC6.8□□□□□ -1.32
GRIK1P39086 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
GRIK1P39086 AC007382.1-201ENST00000624376 2618 ntBASIC6.8□□□□□ -1.32
GRIK1P39086 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.8□□□□□ -1.32
GRIK1P39086 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.8□□□□□ -1.32
GRIK1P39086 MIR3688-2-201ENST00000636963 87 ntBASIC6.8□□□□□ -1.32
GRIK1P39086 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC6.8□□□□□ -1.32
GRIK1P39086 FAM157B-203ENST00000639350 358 ntBASIC6.8□□□□□ -1.32
GRIK1P39086 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.8□□□□□ -1.32
GRIK1P39086 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
GRIK1P39086 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.79□□□□□ -1.32
GRIK1P39086 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.79□□□□□ -1.32
GRIK1P39086 CASC19-246ENST00000641625 1606 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 AC131971.1-201ENST00000332881 1482 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.79□□□□□ -1.32
GRIK1P39086 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
GRIK1P39086 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.79□□□□□ -1.32
GRIK1P39086 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
GRIK1P39086 AC125238.2-201ENST00000430003 1440 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 AC008957.3-201ENST00000624112 2242 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
GRIK1P39086 SNORA63-201ENST00000363450 132 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 RNU1-65P-201ENST00000363919 148 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
GRIK1P39086 RNU6-1042P-201ENST00000384204 107 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 RNU6-348P-201ENST00000384386 107 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 MT-TL1-201ENST00000386347 75 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
GRIK1P39086 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
GRIK1P39086 AL096711.1-201ENST00000404780 554 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 OR2W4P-201ENST00000406496 926 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.79□□□□□ -1.32
GRIK1P39086 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.79□□□□□ -1.32
GRIK1P39086 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC6.79□□□□□ -1.32
GRIK1P39086 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.79□□□□□ -1.32
GRIK1P39086 EMC3-AS1-205ENST00000438698 534 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.79□□□□□ -1.32
GRIK1P39086 MTND3P1-201ENST00000441336 220 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC6.79□□□□□ -1.32
GRIK1P39086 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.79□□□□□ -1.32
GRIK1P39086 AC023245.1-201ENST00000468501 517 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 AC037198.2-201ENST00000478845 733 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 RPL7P42-201ENST00000481005 679 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 AC109462.1-201ENST00000491087 368 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 RN7SL362P-201ENST00000494228 267 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC6.79□□□□□ -1.32
GRIK1P39086 AC025459.1-201ENST00000504072 156 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 SNORA58-201ENST00000505219 137 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 IMPA1P1-201ENST00000510718 842 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC6.79□□□□□ -1.32
GRIK1P39086 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC6.79□□□□□ -1.32
GRIK1P39086 MTCO1P35-201ENST00000515270 228 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.79□□□□□ -1.32
GRIK1P39086 AP001207.1-201ENST00000524051 481 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC6.79□□□□□ -1.32
GRIK1P39086 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.79□□□□□ -1.32
GRIK1P39086 DEFB130C-202ENST00000530001 230 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.79□□□□□ -1.32
GRIK1P39086 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.79□□□□□ -1.32
GRIK1P39086 AC008127.2-201ENST00000549925 1075 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.79□□□□□ -1.32
GRIK1P39086 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.79□□□□□ -1.32
GRIK1P39086 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.79□□□□□ -1.32
GRIK1P39086 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.79□□□□□ -1.32
GRIK1P39086 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.79□□□□□ -1.32
GRIK1P39086 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.79□□□□□ -1.32
GRIK1P39086 BPTFP1-201ENST00000579209 492 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC6.79□□□□□ -1.32
GRIK1P39086 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.79□□□□□ -1.32
GRIK1P39086 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC6.79□□□□□ -1.32
GRIK1P39086 MIR6811-201ENST00000620409 58 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 AC002550.2-201ENST00000621246 394 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 AC012414.7-202ENST00000622705 1090 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.79□□□□□ -1.32
GRIK1P39086 AC111152.1-202ENST00000635848 339 ntBASIC6.79□□□□□ -1.32
GRIK1P39086 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
GRIK1P39086 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
GRIK1P39086 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
GRIK1P39086 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
GRIK1P39086 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
GRIK1P39086 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.79□□□□□ -1.32
GRIK1P39086 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
GRIK1P39086 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
GRIK1P39086 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
GRIK1P39086 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
GRIK1P39086 AC137056.2-201ENST00000624055 1958 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms