Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC007618.1-201ENST00000366455 732 ntBASIC5.16□□□□□ -1.58
HOXA9P31269 RNA5SP332-201ENST00000391063 115 ntBASIC5.16□□□□□ -1.58
HOXA9P31269 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA9P31269 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA9P31269 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA9P31269 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXA9P31269 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA9P31269 CNOT7P1-201ENST00000429006 852 ntBASIC5.16□□□□□ -1.58
HOXA9P31269 AC091390.1-201ENST00000433904 331 ntBASIC5.16□□□□□ -1.58
HOXA9P31269 AL450023.3-201ENST00000440592 271 ntBASIC5.16□□□□□ -1.58
HOXA9P31269 TXNP5-201ENST00000441043 315 ntBASIC5.16□□□□□ -1.58
HOXA9P31269 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA9P31269 AC234781.3-201ENST00000452540 973 ntBASIC5.16□□□□□ -1.58
HOXA9P31269 RNU7-157P-201ENST00000459600 66 ntBASIC5.16□□□□□ -1.58
HOXA9P31269 RN7SL385P-201ENST00000468873 276 ntBASIC5.16□□□□□ -1.58
HOXA9P31269 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA9P31269 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
HOXA9P31269 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.16□□□□□ -1.58
HOXA9P31269 PRELID3BP5-201ENST00000508612 460 ntBASIC5.16□□□□□ -1.58
HOXA9P31269 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA9P31269 BUD31P1-201ENST00000521828 359 ntBASIC5.16□□□□□ -1.58
HOXA9P31269 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA9P31269 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA9P31269 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA9P31269 AC098935.2-201ENST00000604222 466 ntBASIC5.16□□□□□ -1.58
HOXA9P31269 AC104687.2-201ENST00000604442 342 ntBASIC5.16□□□□□ -1.58
HOXA9P31269 AC012557.1-201ENST00000607115 611 ntBASIC5.16□□□□□ -1.58
HOXA9P31269 AL049794.2-201ENST00000616301 365 ntBASIC5.16□□□□□ -1.58
HOXA9P31269 AC087821.1-201ENST00000623639 567 ntBASIC5.16□□□□□ -1.58
HOXA9P31269 FRG1EP-201ENST00000634469 770 ntBASIC5.16□□□□□ -1.58
HOXA9P31269 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HOXA9P31269 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HOXA9P31269 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.16□□□□□ -1.58
HOXA9P31269 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA9P31269 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
HOXA9P31269 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA9P31269 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HOXA9P31269 SOCS5P3-201ENST00000425115 1576 ntBASIC5.16□□□□□ -1.58
HOXA9P31269 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXA9P31269 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA9P31269 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA9P31269 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA9P31269 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
HOXA9P31269 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXA9P31269 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.15□□□□□ -1.58
HOXA9P31269 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.15□□□□□ -1.58
HOXA9P31269 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.15□□□□□ -1.58
HOXA9P31269 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXA9P31269 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXA9P31269 LRRC37BP1-201ENST00000398851 714 ntBASIC5.15□□□□□ -1.59
HOXA9P31269 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
HOXA9P31269 AL035079.1-201ENST00000405210 287 ntBASIC5.15□□□□□ -1.59
HOXA9P31269 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXA9P31269 RPS27AP7-201ENST00000422792 455 ntBASIC5.15□□□□□ -1.59
HOXA9P31269 RPL18P10-201ENST00000425606 538 ntBASIC5.15□□□□□ -1.59
HOXA9P31269 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA9P31269 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXA9P31269 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.15□□□□□ -1.59
HOXA9P31269 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA9P31269 AC112184.1-201ENST00000505179 312 ntBASIC5.15□□□□□ -1.59
HOXA9P31269 AC111000.3-201ENST00000508057 576 ntBASIC5.15□□□□□ -1.59
HOXA9P31269 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXA9P31269 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA9P31269 RNA5SP392-201ENST00000516905 112 ntBASIC5.15□□□□□ -1.59
HOXA9P31269 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXA9P31269 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA9P31269 AC022884.2-201ENST00000578535 580 ntBASIC5.15□□□□□ -1.59
HOXA9P31269 AC018695.5-201ENST00000605872 315 ntBASIC5.15□□□□□ -1.59
HOXA9P31269 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA9P31269 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA9P31269 AC007497.1-201ENST00000610421 561 ntBASIC5.15□□□□□ -1.59
HOXA9P31269 MIR6853-201ENST00000619642 74 ntBASIC5.15□□□□□ -1.59
HOXA9P31269 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXA9P31269 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXA9P31269 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXA9P31269 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.15□□□□□ -1.59
HOXA9P31269 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
HOXA9P31269 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HOXA9P31269 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.15□□□□□ -1.59
HOXA9P31269 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HOXA9P31269 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA9P31269 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA9P31269 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXA9P31269 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA9P31269 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXA9P31269 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA9P31269 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA9P31269 AC011755.1-201ENST00000623763 2049 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA9P31269 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA9P31269 AL031595.2-201ENST00000624215 19071 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 AC093909.5-201ENST00000621839 1799 ntBASIC5.14□□□□□ -1.59
HOXA9P31269 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA9P31269 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA9P31269 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA9P31269 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA9P31269 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
HOXA9P31269 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXA9P31269 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXA9P31269 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms