Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.72□□□□□ -1.65
MT-ND1P03886 SETP1-201ENST00000556014 845 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 NDUFB4P11-201ENST00000560510 395 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.72□□□□□ -1.65
MT-ND1P03886 AP002967.1-201ENST00000624203 539 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.72□□□□□ -1.65
MT-ND1P03886 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.72□□□□□ -1.65
MT-ND1P03886 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.72□□□□□ -1.65
MT-ND1P03886 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.72□□□□□ -1.65
MT-ND1P03886 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MT-ND1P03886 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
MT-ND1P03886 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
MT-ND1P03886 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
MT-ND1P03886 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
MT-ND1P03886 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
MT-ND1P03886 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
MT-ND1P03886 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.71□□□□□ -1.66
MT-ND1P03886 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
MT-ND1P03886 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
MT-ND1P03886 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
MT-ND1P03886 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.71□□□□□ -1.66
MT-ND1P03886 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
MT-ND1P03886 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
MT-ND1P03886 RNA5SP296-201ENST00000410523 111 ntBASIC4.71□□□□□ -1.66
MT-ND1P03886 AC012519.1-201ENST00000424588 610 ntBASIC4.71□□□□□ -1.66
MT-ND1P03886 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.71□□□□□ -1.66
MT-ND1P03886 FAM96AP1-201ENST00000430879 482 ntBASIC4.71□□□□□ -1.66
MT-ND1P03886 RPS29P14-201ENST00000431518 171 ntBASIC4.71□□□□□ -1.66
MT-ND1P03886 CYCSP6-201ENST00000434498 302 ntBASIC4.71□□□□□ -1.66
MT-ND1P03886 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.71□□□□□ -1.66
MT-ND1P03886 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.71□□□□□ -1.66
MT-ND1P03886 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.71□□□□□ -1.66
MT-ND1P03886 AL031584.1-201ENST00000447169 754 ntBASIC4.71□□□□□ -1.66
MT-ND1P03886 RHEBP2-201ENST00000450289 600 ntBASIC4.71□□□□□ -1.66
MT-ND1P03886 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.71□□□□□ -1.66
MT-ND1P03886 AC112206.1-201ENST00000468416 477 ntBASIC4.71□□□□□ -1.66
MT-ND1P03886 RPL7P6-201ENST00000480903 738 ntBASIC4.71□□□□□ -1.66
MT-ND1P03886 RN7SL547P-201ENST00000490793 290 ntBASIC4.71□□□□□ -1.66
MT-ND1P03886 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.71□□□□□ -1.66
MT-ND1P03886 BTG4P1-201ENST00000510421 183 ntBASIC4.71□□□□□ -1.66
MT-ND1P03886 RNU6-941P-201ENST00000516346 108 ntBASIC4.71□□□□□ -1.66
MT-ND1P03886 SNORA70.17-201ENST00000516449 133 ntBASIC4.71□□□□□ -1.66
MT-ND1P03886 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.71□□□□□ -1.66
MT-ND1P03886 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.71□□□□□ -1.66
MT-ND1P03886 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
MT-ND1P03886 AC116553.2-201ENST00000564203 463 ntBASIC4.71□□□□□ -1.66
MT-ND1P03886 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.71□□□□□ -1.66
MT-ND1P03886 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.71□□□□□ -1.66
MT-ND1P03886 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.71□□□□□ -1.66
MT-ND1P03886 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.71□□□□□ -1.66
MT-ND1P03886 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.71□□□□□ -1.66
MT-ND1P03886 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.71□□□□□ -1.66
MT-ND1P03886 KATNBL1P1-201ENST00000605192 748 ntBASIC4.71□□□□□ -1.66
MT-ND1P03886 AP005131.7-201ENST00000610087 611 ntBASIC4.71□□□□□ -1.66
MT-ND1P03886 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.71□□□□□ -1.66
MT-ND1P03886 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.71□□□□□ -1.66
MT-ND1P03886 CYP4F35P-202ENST00000636121 390 ntBASIC4.71□□□□□ -1.66
MT-ND1P03886 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
MT-ND1P03886 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
MT-ND1P03886 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.71□□□□□ -1.66
MT-ND1P03886 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
MT-ND1P03886 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
MT-ND1P03886 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
MT-ND1P03886 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
MT-ND1P03886 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
MT-ND1P03886 AC235565.1-201ENST00000456962 1325 ntBASIC4.71□□□□□ -1.66
MT-ND1P03886 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MT-ND1P03886 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MT-ND1P03886 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MT-ND1P03886 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MT-ND1P03886 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MT-ND1P03886 SOCS5P3-201ENST00000425115 1576 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MT-ND1P03886 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
MT-ND1P03886 AC107068.1-201ENST00000563286 4218 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
MT-ND1P03886 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.7□□□□□ -1.66
MT-ND1P03886 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MT-ND1P03886 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
MT-ND1P03886 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
MT-ND1P03886 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.7□□□□□ -1.66
MT-ND1P03886 MIR1282-201ENST00000408865 101 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 RNA5SP178-201ENST00000410380 128 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 RNU6-564P-201ENST00000410983 104 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 EIF4A1P1-201ENST00000420241 934 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 AC093655.2-201ENST00000425735 631 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 BX323845.1-201ENST00000432417 179 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 MTCYBP29-201ENST00000436327 1006 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 CYCSP11-201ENST00000436426 315 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.7□□□□□ -1.66
MT-ND1P03886 PA2G4P6-201ENST00000438325 1197 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.7□□□□□ -1.66
MT-ND1P03886 RPL10P17-201ENST00000453852 316 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MT-ND1P03886 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.7□□□□□ -1.66
MT-ND1P03886 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.7□□□□□ -1.66
MT-ND1P03886 NPM1P29-201ENST00000483112 803 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MT-ND1P03886 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.7□□□□□ -1.66
MT-ND1P03886 AL671862.1-201ENST00000515851 349 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms