Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC8□□□□□ -1.13
RNF40O75150 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC8□□□□□ -1.13
RNF40O75150 AL049734.2-201ENST00000441066 616 ntBASIC8□□□□□ -1.13
RNF40O75150 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC8□□□□□ -1.13
RNF40O75150 TCEA1P1-201ENST00000449716 880 ntBASIC8□□□□□ -1.13
RNF40O75150 AL136981.1-203ENST00000451452 3844 ntBASIC8□□□□□ -1.13
RNF40O75150 YWHAEP1-201ENST00000453697 763 ntBASIC8□□□□□ -1.13
RNF40O75150 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC8□□□□□ -1.13
RNF40O75150 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC8□□□□□ -1.13
RNF40O75150 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC8□□□□□ -1.13
RNF40O75150 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC8□□□□□ -1.13
RNF40O75150 MTATP8P1-201ENST00000467115 207 ntBASIC8□□□□□ -1.13
RNF40O75150 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC8□□□□□ -1.13
RNF40O75150 AC068587.1-201ENST00000483613 781 ntBASIC8□□□□□ -1.13
RNF40O75150 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC8□□□□□ -1.13
RNF40O75150 RNA5SP135-201ENST00000517019 125 ntBASIC8□□□□□ -1.13
RNF40O75150 RNU6-988P-201ENST00000519081 107 ntBASIC8□□□□□ -1.13
RNF40O75150 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC8□□□□□ -1.13
RNF40O75150 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC8□□□□□ -1.13
RNF40O75150 CASP1-216ENST00000534497 825 ntTSL 5 BASIC8□□□□□ -1.13
RNF40O75150 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC8□□□□□ -1.13
RNF40O75150 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC8□□□□□ -1.13
RNF40O75150 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC8□□□□□ -1.13
RNF40O75150 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC8□□□□□ -1.13
RNF40O75150 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC8□□□□□ -1.13
RNF40O75150 DNM1P33-201ENST00000565222 270 ntBASIC8□□□□□ -1.13
RNF40O75150 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC8□□□□□ -1.13
RNF40O75150 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC8□□□□□ -1.13
RNF40O75150 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC8□□□□□ -1.13
RNF40O75150 AP001330.4-201ENST00000604350 154 ntBASIC8□□□□□ -1.13
RNF40O75150 AC008385.1-201ENST00000604421 355 ntBASIC8□□□□□ -1.13
RNF40O75150 AL359999.1-201ENST00000604513 294 ntBASIC8□□□□□ -1.13
RNF40O75150 CR382285.1-202ENST00000604687 547 ntBASIC8□□□□□ -1.13
RNF40O75150 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC8□□□□□ -1.13
RNF40O75150 DLEU1_2.1-201ENST00000617920 342 ntBASIC8□□□□□ -1.13
RNF40O75150 GAS2-210ENST00000630668 674 ntTSL 5 BASIC8□□□□□ -1.13
RNF40O75150 SRP54-214ENST00000630962 162 ntTSL 5 BASIC8□□□□□ -1.13
RNF40O75150 AL133216.2-202ENST00000634512 349 ntBASIC8□□□□□ -1.13
RNF40O75150 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
RNF40O75150 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
RNF40O75150 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC8□□□□□ -1.13
RNF40O75150 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC8□□□□□ -1.13
RNF40O75150 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RNF40O75150 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC8□□□□□ -1.13
RNF40O75150 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
RNF40O75150 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
RNF40O75150 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC8□□□□□ -1.13
RNF40O75150 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RNF40O75150 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
RNF40O75150 AL157713.1-201ENST00000379752 1531 ntBASIC7.99□□□□□ -1.13
RNF40O75150 RIOK3P1-201ENST00000418778 1528 ntBASIC7.99□□□□□ -1.13
RNF40O75150 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.99□□□□□ -1.13
RNF40O75150 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RNF40O75150 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.99□□□□□ -1.13
RNF40O75150 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.99□□□□□ -1.13
RNF40O75150 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
RNF40O75150 OR11H4-201ENST00000315409 1082 ntBASIC7.99□□□□□ -1.13
RNF40O75150 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
RNF40O75150 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
RNF40O75150 RNU6-223P-201ENST00000362830 107 ntBASIC7.99□□□□□ -1.13
RNF40O75150 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.99□□□□□ -1.13
RNF40O75150 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RNF40O75150 RNU6-209P-201ENST00000384118 107 ntBASIC7.99□□□□□ -1.13
RNF40O75150 FGFR1OP2P1-201ENST00000395943 500 ntBASIC7.99□□□□□ -1.13
RNF40O75150 GAPDHP42-201ENST00000406848 981 ntBASIC7.99□□□□□ -1.13
RNF40O75150 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.99□□□□□ -1.13
RNF40O75150 RBM6-203ENST00000421682 684 ntTSL 2 BASIC7.99□□□□□ -1.13
RNF40O75150 IGKV1OR9-1-201ENST00000424370 284 ntBASIC7.99□□□□□ -1.13
RNF40O75150 RPS7P14-201ENST00000426405 583 ntBASIC7.99□□□□□ -1.13
RNF40O75150 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.99□□□□□ -1.13
RNF40O75150 RPL17P49-201ENST00000443728 411 ntBASIC7.99□□□□□ -1.13
RNF40O75150 AL359091.1-201ENST00000449048 1734 ntBASIC7.99□□□□□ -1.13
RNF40O75150 AC092570.2-201ENST00000452117 1143 ntBASIC7.99□□□□□ -1.13
RNF40O75150 MED28P8-201ENST00000454831 521 ntBASIC7.99□□□□□ -1.13
RNF40O75150 BTF3P5-201ENST00000457252 467 ntBASIC7.99□□□□□ -1.13
RNF40O75150 AC110749.1-201ENST00000462007 357 ntBASIC7.99□□□□□ -1.13
RNF40O75150 AC135999.1-201ENST00000478962 479 ntBASIC7.99□□□□□ -1.13
RNF40O75150 AC012181.1-201ENST00000479895 423 ntBASIC7.99□□□□□ -1.13
RNF40O75150 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.99□□□□□ -1.13
RNF40O75150 RPL38P4-201ENST00000502376 214 ntBASIC7.99□□□□□ -1.13
RNF40O75150 SUMO2P17-201ENST00000504438 285 ntBASIC7.99□□□□□ -1.13
RNF40O75150 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC7.99□□□□□ -1.13
RNF40O75150 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.99□□□□□ -1.13
RNF40O75150 IGHVII-49-1-201ENST00000521760 224 ntBASIC7.99□□□□□ -1.13
RNF40O75150 IGLVI-42-201ENST00000522485 381 ntBASIC7.99□□□□□ -1.13
RNF40O75150 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.99□□□□□ -1.13
RNF40O75150 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.99□□□□□ -1.13
RNF40O75150 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC7.99□□□□□ -1.13
RNF40O75150 AL049869.4-201ENST00000555669 178 ntBASIC7.99□□□□□ -1.13
RNF40O75150 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
RNF40O75150 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC7.99□□□□□ -1.13
RNF40O75150 UBE2Q2P11-201ENST00000559691 205 ntBASIC7.99□□□□□ -1.13
RNF40O75150 AC026464.5-201ENST00000562497 722 ntBASIC7.99□□□□□ -1.13
RNF40O75150 MYL12BP1-201ENST00000569826 507 ntBASIC7.99□□□□□ -1.13
RNF40O75150 WNK1-220ENST00000574564 1401 ntBASIC7.99□□□□□ -1.13
RNF40O75150 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.99□□□□□ -1.13
RNF40O75150 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC7.99□□□□□ -1.13
RNF40O75150 MIR3137-201ENST00000577367 75 ntBASIC7.99□□□□□ -1.13
RNF40O75150 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RNF40O75150 EXOSC3P2-201ENST00000594464 497 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms