Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC073143.1-201ENST00000436316 395 ntBASIC5.55□□□□□ -1.52
PROM1O43490 AC096775.1-201ENST00000437724 448 ntBASIC5.55□□□□□ -1.52
PROM1O43490 AC023141.8-201ENST00000442554 208 ntBASIC5.55□□□□□ -1.52
PROM1O43490 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.55□□□□□ -1.52
PROM1O43490 AC069540.1-201ENST00000446320 988 ntBASIC5.55□□□□□ -1.52
PROM1O43490 PTENP1-201ENST00000447117 1215 ntBASIC5.55□□□□□ -1.52
PROM1O43490 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.55□□□□□ -1.52
PROM1O43490 AL122020.1-201ENST00000472287 459 ntBASIC5.55□□□□□ -1.52
PROM1O43490 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.55□□□□□ -1.52
PROM1O43490 AC079080.1-201ENST00000479841 822 ntBASIC5.55□□□□□ -1.52
PROM1O43490 AC011037.1-201ENST00000483964 558 ntBASIC5.55□□□□□ -1.52
PROM1O43490 RPS4XP14-201ENST00000493072 781 ntBASIC5.55□□□□□ -1.52
PROM1O43490 AC025458.1-201ENST00000506046 166 ntBASIC5.55□□□□□ -1.52
PROM1O43490 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.55□□□□□ -1.52
PROM1O43490 AC034244.1-201ENST00000507687 207 ntBASIC5.55□□□□□ -1.52
PROM1O43490 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.55□□□□□ -1.52
PROM1O43490 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.55□□□□□ -1.52
PROM1O43490 Y_RNA.655-201ENST00000515919 96 ntBASIC5.55□□□□□ -1.52
PROM1O43490 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PROM1O43490 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.55□□□□□ -1.52
PROM1O43490 MTCO2P15-201ENST00000532655 656 ntBASIC5.55□□□□□ -1.52
PROM1O43490 AC090424.1-201ENST00000535243 736 ntBASIC5.55□□□□□ -1.52
PROM1O43490 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.55□□□□□ -1.52
PROM1O43490 GCSHP4-201ENST00000538792 439 ntBASIC5.55□□□□□ -1.52
PROM1O43490 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.55□□□□□ -1.52
PROM1O43490 AL121594.2-201ENST00000541658 472 ntBASIC5.55□□□□□ -1.52
PROM1O43490 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.55□□□□□ -1.52
PROM1O43490 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.55□□□□□ -1.52
PROM1O43490 AC011611.5-201ENST00000552477 578 ntBASIC5.55□□□□□ -1.52
PROM1O43490 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.55□□□□□ -1.52
PROM1O43490 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.55□□□□□ -1.52
PROM1O43490 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.55□□□□□ -1.52
PROM1O43490 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.55□□□□□ -1.52
PROM1O43490 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.55□□□□□ -1.52
PROM1O43490 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PROM1O43490 RBM22P1-201ENST00000578589 1214 ntBASIC5.55□□□□□ -1.52
PROM1O43490 FAM106CP-201ENST00000582212 507 ntBASIC5.55□□□□□ -1.52
PROM1O43490 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.55□□□□□ -1.52
PROM1O43490 AC069366.1-201ENST00000583159 838 ntBASIC5.55□□□□□ -1.52
PROM1O43490 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PROM1O43490 AL035411.2-201ENST00000604022 421 ntBASIC5.55□□□□□ -1.52
PROM1O43490 AC005377.1-201ENST00000605126 456 ntBASIC5.55□□□□□ -1.52
PROM1O43490 AL135786.2-201ENST00000608422 615 ntBASIC5.55□□□□□ -1.52
PROM1O43490 AC096586.1-201ENST00000610267 561 ntBASIC5.55□□□□□ -1.52
PROM1O43490 AC011939.3-201ENST00000613686 466 ntBASIC5.55□□□□□ -1.52
PROM1O43490 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.55□□□□□ -1.52
PROM1O43490 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.55□□□□□ -1.52
PROM1O43490 AC129915.3-201ENST00000634128 948 ntBASIC5.55□□□□□ -1.52
PROM1O43490 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.55□□□□□ -1.52
PROM1O43490 OR8B1P-202ENST00000641132 1178 ntBASIC5.55□□□□□ -1.52
PROM1O43490 AL390862.1-201ENST00000635467 1469 ntBASIC5.55□□□□□ -1.52
PROM1O43490 AL022393.1-201ENST00000625142 1677 ntBASIC5.55□□□□□ -1.52
PROM1O43490 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PROM1O43490 AL359955.1-201ENST00000455242 3275 ntBASIC5.55□□□□□ -1.52
PROM1O43490 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.55□□□□□ -1.52
PROM1O43490 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PROM1O43490 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PROM1O43490 DDX43P2-201ENST00000604753 1354 ntBASIC5.55□□□□□ -1.52
PROM1O43490 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 AP000473.2-201ENST00000602659 1537 ntBASIC5.54□□□□□ -1.52
PROM1O43490 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PROM1O43490 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
PROM1O43490 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
PROM1O43490 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
PROM1O43490 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.54□□□□□ -1.52
PROM1O43490 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 RNA5SP477-201ENST00000362639 119 ntBASIC5.54□□□□□ -1.52
PROM1O43490 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.54□□□□□ -1.52
PROM1O43490 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.54□□□□□ -1.52
PROM1O43490 RNU6-224P-201ENST00000384055 107 ntBASIC5.54□□□□□ -1.52
PROM1O43490 Y_RNA.472-201ENST00000384322 102 ntBASIC5.54□□□□□ -1.52
PROM1O43490 FCF1P5-201ENST00000406490 482 ntBASIC5.54□□□□□ -1.52
PROM1O43490 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.54□□□□□ -1.52
PROM1O43490 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.54□□□□□ -1.52
PROM1O43490 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.54□□□□□ -1.52
PROM1O43490 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.54□□□□□ -1.52
PROM1O43490 AL365396.1-201ENST00000430854 671 ntBASIC5.54□□□□□ -1.52
PROM1O43490 GSTA7P-201ENST00000438425 448 ntBASIC5.54□□□□□ -1.52
PROM1O43490 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.54□□□□□ -1.52
PROM1O43490 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.54□□□□□ -1.52
PROM1O43490 AC068135.1-201ENST00000446164 246 ntBASIC5.54□□□□□ -1.52
PROM1O43490 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.54□□□□□ -1.52
PROM1O43490 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.54□□□□□ -1.52
PROM1O43490 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.54□□□□□ -1.52
PROM1O43490 AL133217.1-201ENST00000450980 425 ntBASIC5.54□□□□□ -1.52
PROM1O43490 HLA-DPA3-207ENST00000454398 229 ntBASIC5.54□□□□□ -1.52
PROM1O43490 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 AC099521.1-201ENST00000482557 334 ntBASIC5.54□□□□□ -1.52
PROM1O43490 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.54□□□□□ -1.52
PROM1O43490 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.54□□□□□ -1.52
PROM1O43490 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms