Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC188H7C350 SALL4P2-201ENST00000423288 2910 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 AL391422.1-201ENST00000402155 436 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 LYPLA1P3-201ENST00000402650 695 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 AL512422.1-201ENST00000407033 553 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 AC002524.1-201ENST00000411687 547 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC188H7C350 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 SETP10-201ENST00000424368 814 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 AC093655.2-201ENST00000425735 631 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC188H7C350 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC188H7C350 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC188H7C350 DNAJA1P5-201ENST00000440278 943 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 AL691517.1-201ENST00000440833 1235 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 RPL7P45-201ENST00000455851 743 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 Z92846.1-201ENST00000456203 268 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 AC108751.2-201ENST00000469993 231 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 RN7SL799P-201ENST00000475891 298 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 RPS4XP20-201ENST00000505751 772 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 AC090568.1-201ENST00000509499 856 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 MTCYBP19-201ENST00000517463 1124 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC188H7C350 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC188H7C350 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.23□□□□□ -1.57
CCDC188H7C350 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC188H7C350 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC188H7C350 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC188H7C350 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC188H7C350 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC188H7C350 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC188H7C350 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC188H7C350 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC188H7C350 MIR8080-201ENST00000622224 89 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 AC009501.3-201ENST00000605001 1352 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 AL034370.1-201ENST00000397254 1590 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC188H7C350 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC188H7C350 AC093591.2-201ENST00000565254 3843 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC188H7C350 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CCDC188H7C350 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CCDC188H7C350 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC188H7C350 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CCDC188H7C350 AL359922.3-201ENST00000624779 1670 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC188H7C350 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC188H7C350 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC188H7C350 AC007342.7-201ENST00000624610 2337 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 AC132825.1-201ENST00000463573 2247 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 PCAT14-202ENST00000627127 3935 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 AC008549.2-201ENST00000333482 706 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC188H7C350 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC188H7C350 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC188H7C350 SETP15-201ENST00000412724 337 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 Z68694.1-201ENST00000413929 841 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC188H7C350 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC188H7C350 RPS26P13-201ENST00000419030 330 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC188H7C350 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC188H7C350 FAM96AP1-201ENST00000430879 482 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC188H7C350 NDUFA5P10-201ENST00000432147 357 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 ZFAND6P1-201ENST00000434138 605 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC188H7C350 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC188H7C350 RPS29P9-201ENST00000440360 171 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 HMGN1P2-201ENST00000445197 310 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 MTND2P25-201ENST00000449028 610 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 HMGB1P4-201ENST00000455362 567 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 AC100832.1-201ENST00000471945 383 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 COL6A4P2-205ENST00000509855 506 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC188H7C350 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC188H7C350 AC022826.1-201ENST00000519383 805 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 OR10D4P-201ENST00000525892 951 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC188H7C350 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC188H7C350 OR8X1P-201ENST00000534542 869 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC188H7C350 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC188H7C350 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC188H7C350 AL731537.2-201ENST00000561565 951 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 AC018552.1-201ENST00000562099 811 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 AC233702.9-201ENST00000581528 203 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC188H7C350 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC188H7C350 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC188H7C350 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC188H7C350 AC104687.2-201ENST00000604442 342 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 AC015982.1-201ENST00000608113 465 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC188H7C350 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC188H7C350 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC188H7C350 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC188H7C350 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC188H7C350 AC145207.9-201ENST00000623802 325 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms