Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AC119744.1-201ENST00000454746 1715 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 Y_RNA.25-201ENST00000362528 102 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 RNU6-582P-201ENST00000362989 107 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 SNORA75-201ENST00000384158 137 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 RNU6-1122P-201ENST00000384449 107 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AL139098.1-201ENST00000407291 389 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AL133445.1-201ENST00000467051 452 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 RPS14P8-201ENST00000478778 369 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 RN7SL714P-201ENST00000487050 298 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 RNU6-885P-201ENST00000516607 104 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 RNU6-1261P-201ENST00000517194 104 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 RN7SKP283-201ENST00000517197 270 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AC093519.1-201ENST00000566109 298 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 MTCO3P24-201ENST00000572729 782 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AC020914.6-201ENST00000594327 272 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AL513477.2-201ENST00000607858 568 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AC024560.3-201ENST00000608482 349 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AC099654.12-201ENST00000639868 649 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AC079753.1-201ENST00000623243 3868 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 AL121768.1-201ENST00000613917 2544 ntBASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.45□□□□□ -1.22
TMEM88BA6NKF7 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 AL079343.1-201ENST00000572358 1771 ntBASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 RNU6-660P-201ENST00000364566 109 ntBASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 ESD-201ENST00000378697 1079 ntTSL 5 BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 RNU6-171P-201ENST00000384354 107 ntBASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 RNU6-272P-201ENST00000411028 104 ntBASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 AC002504.1-201ENST00000438281 691 ntBASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 AL831737.1-201ENST00000441288 271 ntBASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 AC091685.2-201ENST00000454924 864 ntBASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 MRE11P1-201ENST00000464884 2127 ntBASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 RN7SL329P-201ENST00000467740 299 ntBASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 GLRXP3-201ENST00000470810 321 ntBASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 AC006499.3-201ENST00000506077 748 ntBASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC7.44□□□□□ -1.22
TMEM88BA6NKF7 IGKV2-36-201ENST00000519999 223 ntBASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms