Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 AC011458.1-201ENST00000604034 617 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 MIR7155-201ENST00000615925 56 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 BNIP3P41-202ENST00000616656 861 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 AC037198.3-201ENST00000616754 526 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 AL122125.1-201ENST00000616999 600 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 AC006210.2-201ENST00000367074 1545 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.52
SNX9Q9Y5X1 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 AC112198.2-201ENST00000426589 6996 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 SNURFL-201ENST00000309296 343 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 SNORA74A-201ENST00000364089 198 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 AC093162.1-201ENST00000419682 124 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 HSPD1P12-201ENST00000429127 1069 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 UBE2V1P6-201ENST00000430840 422 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 CEACAMP7-201ENST00000444105 496 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 GXYLT1P1-201ENST00000446657 490 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 RBMY2TP-201ENST00000451162 947 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 C1DP3-201ENST00000455013 423 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 RPL32P9-201ENST00000487963 407 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 AC069304.1-201ENST00000491593 704 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 CAB39P1-201ENST00000502277 460 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 AC097173.1-201ENST00000505862 819 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 AC025768.1-201ENST00000510057 267 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 DPRXP4-201ENST00000578053 568 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 AC097372.4-201ENST00000625025 466 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 AC119674.1-220ENST00000641502 1048 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 HSPA8P18-201ENST00000439846 1928 ntBASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX9Q9Y5X1 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 AP000568.1-201ENST00000282964 442 ntBASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 RNA5SP305-201ENST00000362665 119 ntBASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 RNU6-618P-201ENST00000363518 112 ntBASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 AL645927.1-201ENST00000396783 406 ntBASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 RN7SKP114-201ENST00000410327 279 ntBASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 AC092647.3-201ENST00000443044 633 ntBASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 AC004980.4-201ENST00000513375 203 ntBASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 AC013701.1-201ENST00000522657 465 ntBASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 AC125612.1-201ENST00000547580 377 ntBASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms