Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC005962.2-201ENST00000611427 652 ntBASIC6.06□□□□□ -1.44
SCN11AQ9UI33 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 AL031119.1-201ENST00000404707 1879 ntBASIC6.06□□□□□ -1.44
SCN11AQ9UI33 CARF-203ENST00000414439 2099 ntTSL 2 BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 SALL4P2-201ENST00000423288 2910 ntBASIC6.06□□□□□ -1.44
SCN11AQ9UI33 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 RNU4-39P-201ENST00000362455 127 ntBASIC6.06□□□□□ -1.44
SCN11AQ9UI33 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 AC093166.2-201ENST00000455969 1017 ntBASIC6.06□□□□□ -1.44
SCN11AQ9UI33 RPL21P126-201ENST00000470049 478 ntBASIC6.06□□□□□ -1.44
SCN11AQ9UI33 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 AC023424.1-201ENST00000496058 459 ntBASIC6.06□□□□□ -1.44
SCN11AQ9UI33 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 KPNA2P3-201ENST00000584190 848 ntBASIC6.06□□□□□ -1.44
SCN11AQ9UI33 CCDC58P3-201ENST00000590792 430 ntBASIC6.06□□□□□ -1.44
SCN11AQ9UI33 MIR92B-201ENST00000607575 96 ntBASIC6.06□□□□□ -1.44
SCN11AQ9UI33 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 VN2R3P-201ENST00000422626 1412 ntBASIC6.05□□□□□ -1.44
SCN11AQ9UI33 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 AC120338.1-201ENST00000625074 1541 ntBASIC6.05□□□□□ -1.44
SCN11AQ9UI33 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 STX3-208ENST00000641815 3236 ntBASIC6.05□□□□□ -1.44
SCN11AQ9UI33 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 RNU1-13P-201ENST00000384499 162 ntBASIC6.05□□□□□ -1.44
SCN11AQ9UI33 RPL17P50-201ENST00000396131 546 ntBASIC6.05□□□□□ -1.44
SCN11AQ9UI33 PCNPP4-201ENST00000414817 517 ntBASIC6.05□□□□□ -1.44
SCN11AQ9UI33 E2F6P2-201ENST00000420708 748 ntBASIC6.05□□□□□ -1.44
SCN11AQ9UI33 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 CDC27P1-201ENST00000445384 715 ntBASIC6.05□□□□□ -1.44
SCN11AQ9UI33 RPL23AP24-201ENST00000458203 385 ntBASIC6.05□□□□□ -1.44
SCN11AQ9UI33 AC034236.1-201ENST00000469891 373 ntBASIC6.05□□□□□ -1.44
SCN11AQ9UI33 RPL7AP10-201ENST00000481016 791 ntBASIC6.05□□□□□ -1.44
SCN11AQ9UI33 AC097486.1-201ENST00000515331 210 ntBASIC6.05□□□□□ -1.44
SCN11AQ9UI33 AC105031.1-201ENST00000518550 476 ntBASIC6.05□□□□□ -1.44
SCN11AQ9UI33 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 AC067959.1-201ENST00000604334 379 ntBASIC6.05□□□□□ -1.44
SCN11AQ9UI33 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC6.05□□□□□ -1.44
SCN11AQ9UI33 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SCN11AQ9UI33 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SCN11AQ9UI33 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SCN11AQ9UI33 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SCN11AQ9UI33 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
SCN11AQ9UI33 RNU1-130P-201ENST00000363930 160 ntBASIC6.04□□□□□ -1.44
SCN11AQ9UI33 RNA5SP509-201ENST00000364577 119 ntBASIC6.04□□□□□ -1.44
SCN11AQ9UI33 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SCN11AQ9UI33 AL389915.1-201ENST00000422463 466 ntBASIC6.04□□□□□ -1.44
SCN11AQ9UI33 MTND2P28-201ENST00000457540 1044 ntBASIC6.04□□□□□ -1.44
SCN11AQ9UI33 AC245028.2-201ENST00000458673 253 ntBASIC6.04□□□□□ -1.44
SCN11AQ9UI33 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC6.04□□□□□ -1.44
SCN11AQ9UI33 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.04□□□□□ -1.44
SCN11AQ9UI33 AC015912.2-201ENST00000571053 181 ntBASIC6.04□□□□□ -1.44
SCN11AQ9UI33 MIR3138-201ENST00000585238 82 ntBASIC6.04□□□□□ -1.44
SCN11AQ9UI33 RNA5SP439-201ENST00000617595 124 ntBASIC6.04□□□□□ -1.44
SCN11AQ9UI33 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.04□□□□□ -1.44
SCN11AQ9UI33 AP000648.2-201ENST00000624182 404 ntBASIC6.04□□□□□ -1.44
SCN11AQ9UI33 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SCN11AQ9UI33 AC009951.1-201ENST00000623674 2614 ntBASIC6.04□□□□□ -1.44
SCN11AQ9UI33 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SCN11AQ9UI33 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SCN11AQ9UI33 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SCN11AQ9UI33 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SCN11AQ9UI33 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 AC013429.2-201ENST00000418798 781 ntBASIC6.03□□□□□ -1.44
SCN11AQ9UI33 RPL7AP25-201ENST00000423357 805 ntBASIC6.03□□□□□ -1.44
SCN11AQ9UI33 RPL23AP93-201ENST00000440847 484 ntBASIC6.03□□□□□ -1.44
SCN11AQ9UI33 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 RPL10P17-201ENST00000453852 316 ntBASIC6.03□□□□□ -1.44
SCN11AQ9UI33 IGKV2D-10-201ENST00000520194 281 ntBASIC6.03□□□□□ -1.44
SCN11AQ9UI33 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 AC092653.1-201ENST00000608509 531 ntBASIC6.03□□□□□ -1.44
SCN11AQ9UI33 AC015914.2-201ENST00000618167 288 ntBASIC6.03□□□□□ -1.44
SCN11AQ9UI33 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SCN11AQ9UI33 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms