Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 RNU4-28P-201ENST00000364739 141 ntBASIC5.75□□□□□ -1.49
DKK3Q9UBP4 RNA5SP30-201ENST00000365552 115 ntBASIC5.75□□□□□ -1.49
DKK3Q9UBP4 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 MIR143-201ENST00000385300 106 ntBASIC5.75□□□□□ -1.49
DKK3Q9UBP4 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AL596448.1-201ENST00000415024 392 ntBASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AL160175.1-201ENST00000428124 247 ntBASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AC087672.1-201ENST00000479876 766 ntBASIC5.75□□□□□ -1.49
DKK3Q9UBP4 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AC074087.1-201ENST00000512059 724 ntBASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AC092593.2-201ENST00000513866 913 ntBASIC5.75□□□□□ -1.49
DKK3Q9UBP4 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AC022404.1-201ENST00000555320 273 ntBASIC5.75□□□□□ -1.49
DKK3Q9UBP4 MTCYBP23-201ENST00000558717 1102 ntBASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AC122134.1-201ENST00000565664 1104 ntBASIC5.75□□□□□ -1.49
DKK3Q9UBP4 MIR1273E-201ENST00000581165 102 ntBASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 SNX6P1-201ENST00000601728 1224 ntBASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AC113368.1-201ENST00000603736 382 ntBASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AC099785.1-201ENST00000605697 437 ntBASIC5.75□□□□□ -1.49
DKK3Q9UBP4 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 AL137141.1-201ENST00000624622 4836 ntBASIC5.75□□□□□ -1.49
DKK3Q9UBP4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 AC020656.2-201ENST00000613291 5309 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 RNU6-1251P-201ENST00000364502 107 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 RNA5SP131-201ENST00000365452 119 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 BMS1P3-201ENST00000372011 932 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 VDAC2P1-201ENST00000399358 958 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 AL590399.2-201ENST00000427536 309 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 RPS6P15-201ENST00000431996 751 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 USP24P1-201ENST00000433802 779 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 USP9YP24-201ENST00000434374 697 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 VN1R25P-201ENST00000443385 738 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 USP9YP17-201ENST00000444617 696 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 YWHAEP1-201ENST00000453697 763 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 RN7SL515P-201ENST00000463999 297 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 AC109481.1-201ENST00000509173 282 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 RNU6-513P-201ENST00000516104 104 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.74□□□□□ -1.49
DKK3Q9UBP4 NRBF2P4-201ENST00000520874 850 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 AP006245.2-201ENST00000522004 300 ntBASIC5.74□□□□□ -1.49
DKK3Q9UBP4 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms