Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 LRRC37BP1-201ENST00000398851 714 ntBASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 U3.32-201ENST00000408116 212 ntBASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AC098592.2-201ENST00000413158 265 ntBASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 GTF2IP5-201ENST00000414608 731 ntBASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 USP9YP9-201ENST00000429406 715 ntBASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AL450023.3-201ENST00000440592 271 ntBASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 TXNP5-201ENST00000441043 315 ntBASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 OR52J1P-201ENST00000450596 932 ntBASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 PRPF38AP1-201ENST00000451976 933 ntBASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 OR52E3P-201ENST00000452083 936 ntBASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AC008676.3-201ENST00000521237 435 ntBASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AC068993.1-201ENST00000546724 589 ntBASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AC011270.1-201ENST00000558606 583 ntBASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AC006272.2-201ENST00000594725 163 ntBASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 QTRT1P1-201ENST00000604344 1078 ntBASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AL136295.6-201ENST00000610486 658 ntBASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AC091932.2-201ENST00000623014 291 ntBASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 ECM1P2-201ENST00000503354 1577 ntBASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLCF1Q9UBD9 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 SDAD1P1-202ENST00000524156 2051 ntBASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 AC099654.2-201ENST00000433031 1980 ntBASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 RNU6-1331P-201ENST00000363658 106 ntBASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 VN1R31P-201ENST00000417498 730 ntBASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 RBMY2TP-201ENST00000451162 947 ntBASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 FCF1P7-201ENST00000451185 558 ntBASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 AC063943.1-201ENST00000465434 453 ntBASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 RFPL4AP3-201ENST00000515267 345 ntBASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.42□□□□□ -1.7
CLCF1Q9UBD9 MIR3667-201ENST00000581025 74 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms