Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 ZNF652P1-201ENST00000442420 1309 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 AC109780.1-201ENST00000451768 1344 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 U3.30-201ENST00000391308 210 ntBASIC5.2□□□□□ -1.58
SIX2Q9NPC8 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 HMGB3P7-201ENST00000400214 611 ntBASIC5.2□□□□□ -1.58
SIX2Q9NPC8 Z97832.1-201ENST00000402490 328 ntBASIC5.2□□□□□ -1.58
SIX2Q9NPC8 MIR1178-201ENST00000408396 91 ntBASIC5.2□□□□□ -1.58
SIX2Q9NPC8 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 MTND4P15-201ENST00000437913 1033 ntBASIC5.2□□□□□ -1.58
SIX2Q9NPC8 AC092647.3-201ENST00000443044 633 ntBASIC5.2□□□□□ -1.58
SIX2Q9NPC8 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 TRY2P-201ENST00000448860 689 ntBASIC5.2□□□□□ -1.58
SIX2Q9NPC8 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 AL591473.1-201ENST00000464297 313 ntBASIC5.2□□□□□ -1.58
SIX2Q9NPC8 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 ATG10-AS1-201ENST00000504846 648 ntBASIC5.2□□□□□ -1.58
SIX2Q9NPC8 AC112184.1-201ENST00000505179 312 ntBASIC5.2□□□□□ -1.58
SIX2Q9NPC8 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 NPM1P45-201ENST00000583151 559 ntBASIC5.2□□□□□ -1.58
SIX2Q9NPC8 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 RNF138P2-201ENST00000603490 592 ntBASIC5.2□□□□□ -1.58
SIX2Q9NPC8 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 AC007497.1-201ENST00000610421 561 ntBASIC5.2□□□□□ -1.58
SIX2Q9NPC8 AC009163.6-201ENST00000612367 342 ntBASIC5.2□□□□□ -1.58
SIX2Q9NPC8 AC012414.7-202ENST00000622705 1090 ntBASIC5.2□□□□□ -1.58
SIX2Q9NPC8 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 AC099654.2-201ENST00000433031 1980 ntBASIC5.2□□□□□ -1.58
SIX2Q9NPC8 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.2□□□□□ -1.58
SIX2Q9NPC8 CIR1P2-201ENST00000514821 1342 ntBASIC5.2□□□□□ -1.58
SIX2Q9NPC8 TLK1P1-201ENST00000456760 2440 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 RNU1-83P-201ENST00000363426 164 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 AL359643.1-201ENST00000404109 423 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 AL139039.2-201ENST00000407436 479 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 OR51B3P-201ENST00000412287 913 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 CHEK2P3-201ENST00000416118 248 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 AL390879.2-203ENST00000426943 1121 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 MTCO1P57-201ENST00000432182 261 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 RPS17P8-201ENST00000434525 335 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 AP000949.1-201ENST00000438328 629 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 AL445433.1-201ENST00000457507 257 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 OR51A1P-201ENST00000511110 946 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 AL121932.1-201ENST00000605542 214 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 AL445222.1-201ENST00000607259 628 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 AP001521.2-201ENST00000608772 546 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 AC112694.2-201ENST00000623697 768 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 CR381572.2-201ENST00000624852 397 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 AL138960.2-201ENST00000625145 535 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 HSPA8P18-201ENST00000439846 1928 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.19□□□□□ -1.58
SIX2Q9NPC8 SCARNA15-201ENST00000607520 4325 ntBASIC5.19□□□□□ -1.58
SIX2Q9NPC8 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms