Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 OR11I1P-201ENST00000486033 954 ntBASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 RN7SKP34-201ENST00000516142 244 ntBASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 RN7SKP147-201ENST00000517154 244 ntBASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 AP001804.2-201ENST00000533932 910 ntBASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 AL358913.1-201ENST00000554342 121 ntBASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 CYCSP40-201ENST00000575927 294 ntBASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 AL158062.1-201ENST00000619632 745 ntBASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 AC243960.7-201ENST00000623532 707 ntBASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 AC008758.3-201ENST00000507003 1829 ntBASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 DHX9P1-201ENST00000436565 3076 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 RNU4-4P-201ENST00000364588 130 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 CHMP1B2P-201ENST00000399581 597 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 AL021331.1-201ENST00000402817 582 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 AP002530.1-201ENST00000405705 684 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 SNORA79B-201ENST00000410557 148 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 RAB9AP4-201ENST00000415230 609 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 AC069304.1-201ENST00000491593 704 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 NDUFA5P12-201ENST00000503796 343 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 HMGB3P16-201ENST00000508037 287 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 AP000676.2-201ENST00000529711 301 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 MIR4646-201ENST00000580775 63 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 AC006272.2-201ENST00000594725 163 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 AC010424.2-201ENST00000607594 443 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 AP001521.2-201ENST00000608772 546 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 AL122125.1-201ENST00000616999 600 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 AC074140.1-201ENST00000621617 208 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 AC019206.1-201ENST00000621938 425 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 SMG1P6-201ENST00000532337 2930 ntBASIC5.51□□□□□ -1.53
CCSER1Q9C0I3 CASC19-281ENST00000642118 1554 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 AC025574.1-201ENST00000554784 1653 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 AC008549.2-201ENST00000333482 706 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 RNU6-729P-201ENST00000384399 107 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 MIR137-201ENST00000385223 102 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 RN7SKP125-201ENST00000410481 302 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 GTF2IP5-201ENST00000414608 731 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 TBCAP2-201ENST00000416175 326 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 AC093162.1-201ENST00000419682 124 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 CKS1BP6-201ENST00000424932 240 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 OR2AH1P-201ENST00000425717 928 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 AC092647.3-201ENST00000443044 633 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 RPL23AP56-201ENST00000460778 453 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 RN7SL610P-201ENST00000463845 291 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 RN7SL826P-201ENST00000479724 288 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 AC090686.1-201ENST00000481577 749 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 AC140172.1-201ENST00000502928 141 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 RNA5SP303-201ENST00000516192 130 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 BNIP3P1-201ENST00000547295 580 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 AC133644.2-201ENST00000608142 540 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 AC073575.2-201ENST00000614212 627 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 AC112694.2-201ENST00000623697 768 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 AC107021.2-201ENST00000567714 2095 ntBASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms